RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1108487" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1108487 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2764157 2764157 PRJNA1108487_P_NODE_4463_length_330_cov_2.315175_g4397_i0 PRJNA1108487 4463 330 2.315175 7.6400775 Kickxella alabastrina 61397 Fungi Fungi 119 3.0200000000000002e-22   NTclustered gi|2324019812|ref|XM_051537123.1| 61397 g4397 i0 81.169 3.36666666666667 154 24 45 3 7 156 322 474 Kickxella alabastrina ubiquitin and ribosomal protein S27a-like protein (BX661DRAFT_186951), mRNA blastn 1111 119 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
18065125 18065125 PRJNA1108487_P_NODE_6235_length_287_cov_2.186916_g6169_i0 PRJNA1108487 6235 287 2.186916 6.27644892 Linderina pennispora 61395 Fungi Fungi 165 3.27e-36   NTclustered gi|2028324920|ref|XM_040888337.1| 61395 g6169 i0 79.498 45.5679442508711 239 43 82 6 1 236 668 433 Linderina pennispora uncharacterized protein (DL89DRAFT_269536), partial mRNA blastn 13078 165 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;