RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1108487" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1108487 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7398395 7398395 PRJNA1108487_P_NODE_9566_length_248_cov_0.891429_g9500_i0 PRJNA1108487 9566 248 0.891429 2.21074392 Metazoa 33208 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2917940687|emb|OZ237555.1| 6108 g9500 i0 100 1.07661290322581 30 0 12 0 217 246 20197364 20197335 Anemonia sulcata genome assembly, chromosome: 1 blastn 267 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
15048285 15048285 PRJNA1108487_P_NODE_5452_length_304_cov_1.904762_g5386_i0 PRJNA1108487 5452 304 1.904762 5.79047648 Myxozoa 35581 Cnidaria other_Eukaryota 130 1.27e-25   NTclustered gi|241911758|gb|FJ417064.1| 371547 g5386 i0 86.667 31.3322368421053 120 13 39 2 170 289 1958 2074 Myxidium incurvatum isolate M0308 28S large subunit ribosomal RNA gene, partial sequence blastn 9525 130 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium incurvatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;