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contig_metadata

26 rows where analysis = "blastn", bioproject = "PRJNA1108487" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 26 ✖

tax_clade 1

bioproject 1

  • PRJNA1108487 · 26 ✖

analysis 1

  • blastn · 26 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2296035 2296035 PRJNA1108487_P_NODE_2022_length_478_cov_8.817284_g1956_i0 PRJNA1108487 2022 478 8.817284 42.14661752 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 427 6.619999999999998e-115   NTclustered gi|10805|emb|X52242.1| 5911 g1956 i0 84.127 90.0690376569038 441 70 92 0 1 441 38 478 T.thermophila mRNA for calmodulin blastn 43053 427 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
5316309 5316309 PRJNA1108487_P_NODE_3225_length_379_cov_3.787582_g3159_i0 PRJNA1108487 3225 379 3.787582 14.35493578 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 645 1.3e-180   NTclustered gi|301014695|gb|GQ377692.1| 151077 g3159 i0 97.361 64.1662269129288 379 10 100 0 1 379 393 15 Chilodonella uncinata ribosomal protein S23a-like (rps23a) mRNA, complete sequence blastn 24319 645 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
6591517 6591517 PRJNA1108487_P_NODE_3186_length_382_cov_1.245955_g3120_i0 PRJNA1108487 3186 382 1.245955 4.7595481 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 492 1.81e-134   NTclustered gi|300676719|gb|GQ377693.1| 151077 g3120 i0 90.026 7.36125654450262 381 36 99 2 3 382 246 625 Chilodonella uncinata gcr5-like mRNA, partial sequence blastn 2812 492 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
7398380 7398380 PRJNA1108487_P_NODE_1966_length_484_cov_3.245742_g1900_i0 PRJNA1108487 1966 484 3.245742 15.70939128 Vorticella 60849 SAR_Eukaryotes SAR_Eukaryotes 894 0   NTclustered gi|363412153|gb|JN120227.1| 60850 g1900 i0 100 100.010330578512 484 0 100 0 1 484 950 467 Vorticella convallaria isolate 96Vorsp16 18S ribosomal RNA gene, partial sequence blastn 48405 894 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella convallaria
9141030 9141030 PRJNA1108487_P_NODE_2328_length_445_cov_1.655914_g2262_i0 PRJNA1108487 2328 445 1.655914 7.3688173 Tetmemena sp. Y1 1640447 SAR_Eukaryotes SAR_Eukaryotes 444 6.08e-120   NTclustered gi|1710560089|gb|MN207909.1| 1640447 g2262 i0 94.158 2.69887640449438 291 17 65 0 146 436 400 110 Tetmemena sp. Y1 catalase gene, partial cds; macronuclear blastn 1201 444 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Tetmemena Tetmemena sp. Y1
9141034 9141034 PRJNA1108487_P_NODE_2568_length_423_cov_1.697143_g2502_i0 PRJNA1108487 2568 423 1.697143 7.17891489 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 756 0   NTclustered gi|300676714|gb|GQ377691.1| 151077 g2502 i0 99.052 53.0118203309693 422 3 99 1 3 423 450 29 Chilodonella uncinata rps22a (rps22a) mRNA, complete cds blastn 22424 756 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
9141068 9141068 PRJNA1108487_P_NODE_5788_length_296_cov_2.080717_g5722_i0 PRJNA1108487 5788 296 2.080717 6.15892232 Tetmemena sp. Y1 1640447 SAR_Eukaryotes SAR_Eukaryotes 248 3.27e-61   NTclustered gi|1227052606|gb|KY038460.1| 1640447 g5722 i0 81.879 11.7567567567568 298 50 100 3 1 296 321 26 Tetmemena sp. Y1 heat shock protein 70 (hsp70) gene, partial cds; macronuclear blastn 3480 248 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Tetmemena Tetmemena sp. Y1
9141076 9141076 PRJNA1108487_P_NODE_7748_length_261_cov_1.659574_g7682_i0 PRJNA1108487 7748 261 1.659574 4.33148814 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 187 6.2499999999999984e-43   NTclustered gi|347439289|gb|JN111993.1| 151077 g7682 i0 82.11 1.67049808429119 218 39 84 0 44 261 541 758 Chilodonella uncinata strain USA_WH clone P3 beta tubulin (btub) gene, partial cds; macronuclear blastn 436 187 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
9141077 9141077 PRJNA1108487_P_NODE_7768_length_261_cov_1.441489_g7702_i0 PRJNA1108487 7768 261 1.441489 3.76228629 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 351 2.1e-92   NTclustered gi|110277428|gb|DQ662856.1| 151077 g7702 i0 90.909 15.9578544061303 264 21 100 2 1 261 646 383 Chilodonella uncinata heat shock protein 90 gene, partial cds; macronuclear blastn 4165 351 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
10416863 10416863 PRJNA1108487_P_NODE_449_length_939_cov_4.836028_g382_i1 PRJNA1108487 449 939 4.836028 45.41030292 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 1555 0   NTclustered gi|110645063|gb|DQ665311.1| 151077 g382 i1 96.976 13.8764643237487 926 28 99 0 12 937 1205 280 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 13030 1555 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
11692083 11692083 PRJNA1108487_P_NODE_10270_length_245_cov_2.680233_g10204_i0 PRJNA1108487 10270 245 2.680233 6.56657085 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 115 2.7800000000000003e-21   NTclustered gi|829192014|ref|XM_012799966.1| 312017 g10204 i0 88.421 1.71428571428571 95 11 39 0 109 203 219 125 Tetrahymena thermophila SB210 hypothetical protein partial mRNA blastn 420 115 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
11692088 11692088 PRJNA1108487_P_NODE_1490_length_545_cov_6.438559_g1425_i0 PRJNA1108487 1490 545 6.438559 35.09014655 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 963 0   NTclustered gi|512134943|gb|JX178902.1| 1295638 g1425 i0 98.532 94.4422018348624 545 8 100 0 1 545 1544 1000 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 51471 963 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
12967272 12967272 PRJNA1108487_P_NODE_431_length_953_cov_3.479545_g382_i0 PRJNA1108487 431 953 3.479545 33.16006385 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 1472 0   NTclustered gi|110645063|gb|DQ665311.1| 151077 g382 i0 95.361 14.386149003148 927 41 97 2 26 951 1205 280 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 13710 1472 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
12967273 12967273 PRJNA1108487_P_NODE_4691_length_323_cov_3.036000_g4625_i0 PRJNA1108487 4691 323 3.036 9.80628 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 490 5.42e-134   NTclustered gi|110645063|gb|DQ665311.1| 151077 g4625 i0 98.556 95.343653250774 277 4 86 0 47 323 1 277 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 30796 490 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
12967293 12967293 PRJNA1108487_P_NODE_7791_length_260_cov_3.491979_g7725_i0 PRJNA1108487 7791 260 3.491979 9.0791454 Tetmemena sp. Y1 1640447 SAR_Eukaryotes SAR_Eukaryotes 147 1.06e-30   NTclustered gi|1710560089|gb|MN207909.1| 1640447 g7725 i0 95.604 0.461538461538462 91 4 35 0 13 103 101 11 Tetmemena sp. Y1 catalase gene, partial cds; macronuclear blastn 120 147 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Tetmemena Tetmemena sp. Y1
12967294 12967294 PRJNA1108487_P_NODE_791_length_726_cov_3.111792_g730_i0 PRJNA1108487 791 726 3.111792 22.59160992 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 974 0   NTclustered gi|390195606|gb|JX112363.1| 151077 g730 i0 91.942 99.2589531680441 695 56 96 0 1 695 695 1 Chilodonella uncinata strain USA_SC2 beta-tubulin (Btub) gene, partial cds; macronuclear blastn 72062 974 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
14242198 14242198 PRJNA1108487_P_NODE_1232_length_597_cov_4.946565_g1167_i0 PRJNA1108487 1232 597 4.946565 29.53099305 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 944 0   NTclustered gi|300521444|gb|GQ377690.1| 151077 g1167 i0 95.586 14.820770519263 589 26 99 0 9 597 181 769 Chilodonella uncinata 14-3-3 protein-like mRNA, partial sequence blastn 8848 944 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
16323117 16323117 PRJNA1108487_P_NODE_8673_length_252_cov_0.871508_g8607_i0 PRJNA1108487 8673 252 0.871508 2.19620016 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 159 1.31e-34   NTclustered gi|151384832|gb|EF672110.1| 5911 g8607 i0 78.4 10.2222222222222 250 50 98 3 4 251 689 442 Tetrahymena thermophila dynein heavy chain 9 (DYH9) gene, partial cds; macronuclear blastn 2576 159 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
16790579 16790579 PRJNA1108487_P_NODE_5514_length_303_cov_1.230435_g5448_i0 PRJNA1108487 5514 303 1.230435 3.72821805 Telotrochidium matiense 455295 SAR_Eukaryotes SAR_Eukaryotes 244 4.3399999999999997e-60   NTclustered gi|21898545|gb|AY101355.1| 455295 g5448 i0 84.836 18.3300330033003 244 35 80 1 8 249 255 12 Opisthonecta matiensis actin II gene, partial cds blastn 5554 244 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Opisthonectidae Telotrochidium Telotrochidium matiense
16790582 16790582 PRJNA1108487_P_NODE_594_length_836_cov_11.608126_g537_i0 PRJNA1108487 594 836 11.608126 97.04393336 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 1406 0   NTclustered gi|1389430803|gb|MH341631.1| 1938391 g537 i0 97.017 56.1722488038277 838 22 100 3 1 836 1500 2336 Chilodonella hexasticha strain C. hexasticha SC large subunit ribosomal RNA gene, partial sequence blastn 46960 1406 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
19339306 19339306 PRJNA1108487_P_NODE_5956_length_292_cov_2.621005_g5890_i0 PRJNA1108487 5956 292 2.621005 7.6533346 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 335 2.4e-87   NTclustered gi|390195606|gb|JX112363.1| 151077 g5890 i0 87.329 34.9006849315069 292 37 100 0 1 292 188 479 Chilodonella uncinata strain USA_SC2 beta-tubulin (Btub) gene, partial cds; macronuclear blastn 10191 335 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
20614532 20614532 PRJNA1108487_P_NODE_10557_length_244_cov_1.824561_g10491_i0 PRJNA1108487 10557 244 1.824561 4.45192884 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 342 1.17e-89   NTclustered gi|149394715|gb|EF125697.1| 151077 g10491 i0 92.469 4.36885245901639 239 18 98 0 1 239 676 438 Chilodonella uncinata strain ATCC 50194 serine/threonine protein phosphatase-like gene, complete sequence; macronuclear blastn 1066 342 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
21890247 21890247 PRJNA1108487_P_NODE_4278_length_336_cov_2.604563_g4212_i0 PRJNA1108487 4278 336 2.604563 8.75133168 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 350 1e-91   NTclustered gi|390195606|gb|JX112363.1| 151077 g4212 i0 91.373 87.2440476190476 255 22 76 0 3 257 677 931 Chilodonella uncinata strain USA_SC2 beta-tubulin (Btub) gene, partial cds; macronuclear blastn 29314 350 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
24439338 24439338 PRJNA1108487_P_NODE_4200_length_339_cov_1.172932_g4134_i0 PRJNA1108487 4200 339 1.172932 3.97623948 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 472 2.07e-128   NTclustered gi|110277428|gb|DQ662856.1| 151077 g4134 i0 91.74 2.88495575221239 339 28 100 0 1 339 1312 1650 Chilodonella uncinata heat shock protein 90 gene, partial cds; macronuclear blastn 978 472 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
24439352 24439352 PRJNA1108487_P_NODE_6860_length_275_cov_1.544554_g6794_i0 PRJNA1108487 6860 275 1.544554 4.2475235 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 270 6.41e-68   NTclustered gi|300521444|gb|GQ377690.1| 151077 g6794 i0 84.532 13.8909090909091 278 37 100 3 1 275 558 284 Chilodonella uncinata 14-3-3 protein-like mRNA, partial sequence blastn 3820 270 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
25246967 25246967 PRJNA1108487_P_NODE_3020_length_390_cov_6.675079_g2954_i0 PRJNA1108487 3020 390 6.675079 26.0328081 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 693 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g2954 i0 98.718 79.7333333333333 390 5 100 0 1 390 2403 2792 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 31096 693 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;