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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA1108487" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA1108487 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1488085 1488085 PRJNA1108487_P_NODE_1822_length_500_cov_4.608899_g1756_i0 PRJNA1108487 1822 500 4.608899 23.044495 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 608 2.309999999999999e-169   NTclustered gi|300676750|gb|GQ377668.1| 45107 g1756 i0 88.755 99.37 498 54 99 2 1 497 494 990 Heteromita globosa actin gene, partial cds blastn 49685 608 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
2764158 2764158 PRJNA1108487_P_NODE_4483_length_330_cov_0.910506_g4417_i0 PRJNA1108487 4483 330 0.910506 3.0046698 Gymnophrys sp. ATCC 50923 646463 SAR_Eukaryotes SAR_Eukaryotes 475 1.5599999999999994e-129   NTclustered gi|302026148|gb|GQ377646.1| 646463 g4417 i0 93.189 99.2666666666667 323 22 98 0 1 323 74 396 Gymnophrys sp. ATCC 50923 beta-tubulin (Btub) gene, partial cds blastn 32758 475 1 Eukaryota Sar   Cercozoa       Gymnophrys Gymnophrys sp. ATCC 50923
5316296 5316296 PRJNA1108487_P_NODE_11585_length_229_cov_25.615385_g11519_i0 PRJNA1108487 11585 229 25.615385 58.65923165 Bodomorpha sp. HFCC 92 458884 SAR_Eukaryotes SAR_Eukaryotes 422 1.35e-113   NTclustered gi|197723521|gb|EF681900.2| 458884 g11519 i0 100 100.379912663755 228 0 99 0 1 228 714 941 Bodomorpha sp. HFCC 92 28S ribosomal RNA gene, partial sequence blastn 22987 422 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC 92
13773859 13773859 PRJNA1108487_P_NODE_3671_length_358_cov_3.740351_g3605_i0 PRJNA1108487 3671 358 3.740351 13.39045658 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 640 5.689999999999999e-179   NTclustered gi|225216798|gb|FJ176713.1| 458884 g3605 i0 98.886 100.653631284916 359 3 100 1 1 358 1624 1266 Bodomorpha sp. HFCC92 18S ribosomal RNA gene, partial sequence blastn 36034 640 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC 92
16790534 16790534 PRJNA1108487_P_NODE_1034_length_648_cov_2.838261_g971_i0 PRJNA1108487 1034 648 2.838261 18.39193128 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 305 4.48e-78   NTclustered gi|300521445|gb|GQ377709.1| 323453 g971 i0 83.086 16.8271604938272 337 55 52 2 297 632 698 363 Heteromita sp. PRA-74 14-3-3 protein-like mRNA, partial sequence blastn 10904 305 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
18065078 18065078 PRJNA1108487_P_NODE_10535_length_245_cov_0.906977_g10469_i0 PRJNA1108487 10535 245 0.906977 2.22209365 Cercozoa sp. Hf_SH1_KV 563738 SAR_Eukaryotes SAR_Eukaryotes 195 3.47e-45   NTclustered gi|224996455|gb|FJ654288.1| 563738 g10469 i0 86.813 46.6571428571429 182 14 71 8 52 226 2 180 Cercozoa sp. Hf_SH1_KV 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11431 195 1 Eukaryota Sar   Cercozoa         Cercozoa sp. Hf_SH1_KV
18065121 18065121 PRJNA1108487_P_NODE_5435_length_305_cov_0.818966_g5369_i0 PRJNA1108487 5435 305 0.818966 2.4978463 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 420 6.77e-113   NTclustered gi|300676732|gb|GQ377662.1| 188950 g5369 i0 91.749 35.6393442622951 303 23 99 2 2 303 203 504 Bodomorpha minima alpha-tubulin (Atub) gene, partial cds blastn 10870 420 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
18872162 18872162 PRJNA1108487_P_NODE_8115_length_255_cov_15.373626_g8049_i0 PRJNA1108487 8115 255 15.373626 39.2027463 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 472 1.5e-128   NTclustered gi|225216798|gb|FJ176713.1| 458884 g8049 i0 100 101.372549019608 255 0 100 0 1 255 372 118 Bodomorpha sp. HFCC92 18S ribosomal RNA gene, partial sequence blastn 25850 472 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC 92
19339285 19339285 PRJNA1108487_P_NODE_3336_length_373_cov_12.183333_g3270_i0 PRJNA1108487 3336 373 12.183333 45.44383209 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 514 3.77e-141   NTclustered gi|238617602|gb|FJ973377.1| 188950 g3270 i0 91.534 101.235924932976 378 24 100 8 1 373 3048 2674 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 37761 514 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
20614550 20614550 PRJNA1108487_P_NODE_3057_length_389_cov_1.047468_g2991_i0 PRJNA1108487 3057 389 1.047468 4.07465052 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 479 1.4399999999999996e-130   NTclustered gi|302026154|gb|GQ377660.1| 188950 g2991 i0 88.946 83.1670951156812 389 42 100 1 1 389 477 90 Bodomorpha minima beta-tubulin (Btub) gene, partial cds blastn 32352 479 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
20614564 20614564 PRJNA1108487_P_NODE_477_length_917_cov_13.802133_g426_i0 PRJNA1108487 477 917 13.802133 126.56555961 Bodomorpha sp. HFCC 92 458884 SAR_Eukaryotes SAR_Eukaryotes 1334 0   NTclustered gi|197723521|gb|EF681900.2| 458884 g426 i0 98.67 55.5387131952017 752 10 82 0 166 917 1 752 Bodomorpha sp. HFCC 92 28S ribosomal RNA gene, partial sequence blastn 50929 1334 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC 92
21890260 21890260 PRJNA1108487_P_NODE_6438_length_283_cov_1.485714_g6372_i0 PRJNA1108487 6438 283 1.485714 4.20457062 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 259 1.43e-64   NTclustered gi|238617602|gb|FJ973377.1| 188950 g6372 i0 84.375 51.0706713780919 288 19 100 13 1 283 2718 2984 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 14453 259 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
23165739 23165739 PRJNA1108487_P_NODE_2519_length_427_cov_33.468927_g2453_i0 PRJNA1108487 2519 427 33.468927 142.91231829 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 294 6.2e-75   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g2453 i0 81.53 47.3864168618267 379 51 88 11 51 427 4021 3660 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 20234 294 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;