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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA1108487" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 12 ✖

bioproject 1

  • PRJNA1108487 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
213402 213402 PRJNA1108487_P_NODE_2161_length_461_cov_3.319588_g2095_i0 PRJNA1108487 2161 461 3.319588 15.30330068 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 259 2.46e-64   NTclustered gi|470420864|ref|XM_004337293.1| 1257118 g2095 i0 82.026 50.0802603036876 306 53 66 2 1 305 328 24 Acanthamoeba castellanii str. Neff Peptidylprolyl cis-trans isomerase (ACA1_221090), partial mRNA blastn 23087 259 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
1488101 1488101 PRJNA1108487_P_NODE_3782_length_354_cov_1.882562_g3716_i0 PRJNA1108487 3782 354 1.882562 6.66426948 Didymium quitense 2059305 Evosea other_Eukaryota 222 2.41e-53   NTclustered gi|2329703132|gb|MW239927.1| 2059305 g3716 i0 79.141 80.9604519774011 326 64 92 4 16 339 214 537 Didymium quitense strain MA-Fungi 88326 alpha tubulin (aTUB) gene, partial cds blastn 28660 222 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium quitense
4040240 4040240 PRJNA1108487_P_NODE_8504_length_252_cov_1.743017_g8438_i0 PRJNA1108487 8504 252 1.743017 4.39240284 Cavenderia fasciculata 261658 Evosea other_Eukaryota 89.8 1.74e-13   NTclustered gi|187764061|ref|NC_010653.1| 261658 g8438 i0 98.039 0.428571428571429 51 1 20 0 122 172 21177 21227 Dictyostelium fasciculatum mitochondrion, complete genome blastn 108 89.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
5316314 5316314 PRJNA1108487_P_NODE_3805_length_353_cov_1.489286_g3739_i0 PRJNA1108487 3805 353 1.489286 5.25717958 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 58.4 7.17e-4   NTclustered gi|470469416|ref|XM_004341948.1| 1257118 g3739 i0 83.077 0.18413597733711 65 9 18 2 216 279 884 821 Acanthamoeba castellanii str. Neff MORN repeatcontaining protein (ACA1_050500), partial mRNA blastn 65 58.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6591520 6591520 PRJNA1108487_P_NODE_3846_length_352_cov_0.992832_g3780_i0 PRJNA1108487 3846 352 0.992832 3.49476864 Dictyostelium discoideum 44689 Evosea other_Eukaryota 276 1.81e-69   NTclustered gi|66818754|ref|XM_637945.1| 352472 g3780 i0 81.02 1.00284090909091 353 61 99 6 2 351 223 572 Dictyostelium discoideum AX4 tyrosine-tRNA ligase (tyrS) mRNA, complete cds blastn 353 276 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
6591538 6591538 PRJNA1108487_P_NODE_726_length_758_cov_18.759124_g667_i0 PRJNA1108487 726 758 18.759124 142.19415992 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 344 1.12e-89   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g667 i0 79.31 61.0488126649077 522 85 67 18 197 707 522 13 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 46275 344 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7398383 7398383 PRJNA1108487_P_NODE_3466_length_367_cov_2.653061_g3400_i0 PRJNA1108487 3466 367 2.653061 9.73673387 Tubulinea 555369 Tubulinea other_Eukaryota 678 0   NTclustered gi|11527302|gb|AF293895.1|AF293895 136450 g3400 i0 100 75.1798365122616 367 0 100 0 1 367 1013 647 Echinamoeba exundans small subunit ribosomal RNA gene, complete sequence blastn 27591 678 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida   Echinamoebidae Echinamoeba Echinamoeba exundans
7866159 7866159 PRJNA1108487_P_NODE_1907_length_491_cov_2.468900_g1841_i0 PRJNA1108487 1907 491 2.4689 12.122299 Acytostelium subglobosum 361139 Evosea other_Eukaryota 154 1.28e-32   NTclustered gi|831753332|ref|XM_012892328.1| 1410327 g1841 i0 80.184 0.883910386965377 217 33 43 7 262 473 782 571 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 434 154 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
7866167 7866167 PRJNA1108487_P_NODE_2427_length_435_cov_2.560773_g2361_i0 PRJNA1108487 2427 435 2.560773 11.13936255 Acytostelium subglobosum 361139 Evosea other_Eukaryota 165 5.17e-36   NTclustered gi|831770213|ref|XM_012897483.1| 1410327 g2361 i0 74.163 16.1770114942529 418 98 95 10 21 432 181 594 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 7037 165 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
10416872 10416872 PRJNA1108487_P_NODE_5969_length_292_cov_1.424658_g5903_i0 PRJNA1108487 5969 292 1.424658 4.16000136 Acytostelium subglobosum 361139 Evosea other_Eukaryota 115 3.4e-21   NTclustered gi|831792201|ref|XM_012904512.1| 1410327 g5903 i0 79.412 21.7945205479452 170 29 57 6 48 214 1166 1000 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 6364 115 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
15516043 15516043 PRJNA1108487_P_NODE_533_length_875_cov_2.316708_g480_i0 PRJNA1108487 533 875 2.316708 20.271195 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 544 1.19e-149   NTclustered gi|470510585|ref|XM_004351497.1| 1257118 g480 i0 78.207 92.2822857142857 881 170 99 16 6 875 493 1362 Acanthamoeba castellanii str. Neff transport protein Sec61 alpha subunit, putative (ACA1_149400), partial mRNA blastn 80747 544 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24439300 24439300 PRJNA1108487_P_NODE_1020_length_652_cov_2.027634_g957_i0 PRJNA1108487 1020 652 2.027634 13.22017368 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 355 4.41e-93   NTclustered gi|470512227|ref|XM_004352398.1| 1257118 g957 i0 78.061 75.0061349693252 588 112 89 13 17 597 31 608 Acanthamoeba castellanii str. Neff succinyl coenzyme A synthetase alpha subunit (ACA1_359750), partial mRNA blastn 48904 355 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;