RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1108009" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1108009 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6591057 6591057 PRJNA1108009_P_NODE_21706_length_274_cov_1.318408_g21388_i0 PRJNA1108009 21706 274 1.318408 3.61243792 Brachionus rotundiformis 96890 Rotifera other_Eukaryota 132 3.1400000000000003e-26   NTclustered gi|1066800225|gb|KX364936.1| 96890 g21388 i0 85.294 46.6970802919708 136 10 50 6 139 274 9474 9599 Brachionus rotundiformis chromosome I mitochondrion, complete sequence blastn 12795 132 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rotundiformis
23165267 23165267 PRJNA1108009_P_NODE_22339_length_269_cov_1.122449_g22021_i0 PRJNA1108009 22339 269 1.122449 3.01938781 Philodina citrina 468664 Rotifera other_Eukaryota 324 4.73e-84   NTclustered gi|407227484|emb|FR856884.1| 468664 g22021 i0 88.848 5.31598513011152 269 23 99 5 1 266 2111 2375 Philodina citrina complete mitochondrial genome blastn 1430 324 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;