contig_metadata
41 rows where analysis = "blastn", bioproject = "PRJNA1108009" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 212659 | 212659 | PRJNA1108009_P_NODE_11361_length_397_cov_2.040123_g11043_i0 | PRJNA1108009 | 11361 | 397 | 2.040123 | 8.09928831 | Escherichia coli | 562 | Bacteria | Bacteria | 108 | 8e-19 | NTclustered | gi|1360517188|emb|LT985297.1| | 562 | g11043 | i0 | 86 | 0.251889168765743 | 100 | 14 | 25 | 0 | 2 | 101 | 222881 | 222980 | Escherichia coli strain B4-25 genome assembly, plasmid: RCS77_p | blastn | 100 | 108 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 213035 | 213035 | PRJNA1108009_P_NODE_25101_length_251_cov_0.865169_g24783_i0 | PRJNA1108009 | 25101 | 251 | 0.865169 | 2.17157419 | Rickettsia tillamookensis | 2761623 | Bacteria | Bacteria | 448 | 2.48e-121 | NTclustered | gi|2334498913|gb|CP060138.2| | 2761623 | g24783 | i0 | 98.805 | 100 | 251 | 3 | 100 | 0 | 1 | 251 | 243841 | 244091 | Rickettsia tillamookensis strain Tillamook 23 chromosome, complete genome | blastn | 25100 | 448 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rickettsiales | Rickettsiaceae | Rickettsia | Rickettsia tillamookensis | ||
| 213110 | 213110 | PRJNA1108009_P_NODE_28281_length_246_cov_0.890173_g27963_i0 | PRJNA1108009 | 28281 | 246 | 0.890173 | 2.18982558 | Comamonas testosteroni | 285 | Bacteria | Bacteria | 414 | 2.46e-111 | NTclustered | gi|2866423841|gb|CP174505.1| | 285 | g27963 | i0 | 97.143 | 28.4146341463415 | 245 | 7 | 99 | 0 | 2 | 246 | 5489969 | 5489725 | Comamonas testosteroni strain VSPL.dLG chromosome, complete genome | blastn | 6990 | 414 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | Comamonas testosteroni | ||
| 1020396 | 1020396 | PRJNA1108009_P_NODE_21601_length_275_cov_1.143564_g21283_i0 | PRJNA1108009 | 21601 | 275 | 1.143564 | 3.144801 | Bradyrhizobium | 374 | Bacteria | Bacteria | 503 | 5.809999999999998e-138 | NTclustered | gi|2557005944|gb|CP126002.1| | 29448 | g21283 | i0 | 99.636 | 110 | 275 | 1 | 100 | 0 | 1 | 275 | 835557 | 835831 | Bradyrhizobium elkanii strain K02K-Be chromosome, complete genome | blastn | 30250 | 503 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium elkanii | ||
| 1487579 | 1487579 | PRJNA1108009_P_NODE_18822_length_298_cov_1.368889_g18504_i0 | PRJNA1108009 | 18822 | 298 | 1.368889 | 4.07928922 | Candidatus Stammera capleta | 2608262 | Bacteria | Bacteria | 52.8 | 0.028 | NTclustered | gi|2676815323|gb|CP144799.1| | 2608262 | g18504 | i0 | 100 | 0.187919463087248 | 28 | 0 | 9 | 0 | 234 | 261 | 146767 | 146794 | MAG: Candidatus Stammera capleta isolate KBEPEHBJ chromosome | blastn | 56 | 52.8 | 1 | Bacteria | ant, tsetse, mealybug, aphid, etc. endosymbionts | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Candidatus Stammera | Candidatus Stammera capleta | |
| 1487673 | 1487673 | PRJNA1108009_P_NODE_22822_length_265_cov_1.203125_g22504_i0 | PRJNA1108009 | 22822 | 265 | 1.203125 | 3.18828125 | Solimonas sp. K1W22B-7 | 2303331 | Bacteria | Bacteria | 427 | 3.44e-115 | NTclustered | gi|1464353590|gb|CP031704.1| | 2303331 | g22504 | i0 | 96.169 | 467.433962264151 | 261 | 10 | 98 | 0 | 1 | 261 | 309017 | 309277 | Solimonas sp. K1W22B-7 chromosome, complete genome | blastn | 123870 | 427 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Nevskiales | Nevskiaceae | Solimonas | Solimonas sp. K1W22B-7 | ||
| 2295936 | 2295936 | PRJNA1108009_P_NODE_20442_length_284_cov_1.293839_g20124_i0 | PRJNA1108009 | 20442 | 284 | 1.293839 | 3.67450276 | root | 1 | Root_unresolved | Root_unresolved | 520 | 5.98e-143 | NTclustered | gi|2211724983|gb|CP066839.1| | 562 | g20124 | i0 | 99.648 | 100 | 284 | 1 | 100 | 0 | 1 | 284 | 4679962 | 4680245 | Escherichia coli strain Ec-RL2-1X chromosome, complete genome | blastn | 28400 | 520 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 2295975 | 2295975 | PRJNA1108009_P_NODE_29402_length_244_cov_0.900585_g29084_i0 | PRJNA1108009 | 29402 | 244 | 0.900585 | 2.1974274 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|2211724983|gb|CP066839.1| | 562 | g29084 | i0 | 100 | 100 | 244 | 0 | 100 | 0 | 1 | 244 | 3302676 | 3302433 | Escherichia coli strain Ec-RL2-1X chromosome, complete genome | blastn | 24400 | 451 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 3571061 | 3571061 | PRJNA1108009_P_NODE_28763_length_245_cov_0.895349_g28445_i0 | PRJNA1108009 | 28763 | 245 | 0.895349 | 2.19360505 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g28445 | i0 | 100 | 100 | 245 | 0 | 100 | 0 | 1 | 245 | 2604314 | 2604070 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 24500 | 453 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 4848465 | 4848465 | PRJNA1108009_P_NODE_12824_length_371_cov_1.550336_g12506_i0 | PRJNA1108009 | 12824 | 371 | 1.550336 | 5.75174656 | Limnobacter | 131079 | Bacteria | Bacteria | 673 | 0 | NTclustered | gi|2591690181|dbj|AP028947.1| | 131080 | g12506 | i0 | 99.461 | 344.544474393531 | 371 | 1 | 99 | 1 | 1 | 370 | 510525 | 510895 | Limnobacter thiooxidans CS-K2 DNA, complete genome | blastn | 127826 | 678 | 0.992625368731563 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Limnobacter | Limnobacter thiooxidans | ||
| 4848549 | 4848549 | PRJNA1108009_P_NODE_29144_length_245_cov_0.895349_g28826_i0 | PRJNA1108009 | 29144 | 245 | 0.895349 | 2.19360505 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g28826 | i0 | 100 | 100 | 245 | 0 | 100 | 0 | 1 | 245 | 2058001 | 2057757 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 24500 | 453 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 6123540 | 6123540 | PRJNA1108009_P_NODE_26385_length_249_cov_0.875000_g26067_i0 | PRJNA1108009 | 26385 | 249 | 0.875 | 2.17875 | Escherichia | 561 | Bacteria | Bacteria | 455 | 1.47e-123 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g26067 | i0 | 100 | 99.289156626506 | 246 | 0 | 99 | 0 | 4 | 249 | 2920187 | 2919942 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 24723 | 455 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 7398248 | 7398248 | PRJNA1108009_P_NODE_13966_length_353_cov_2.135714_g13648_i0 | PRJNA1108009 | 13966 | 353 | 2.135714 | 7.53907042 | Stutzerimonas | 2901164 | Bacteria | Bacteria | 652 | 0 | NTclustered | gi|2638808175|gb|CP140616.1| | 316 | g13648 | i0 | 100 | 382.954674220963 | 353 | 0 | 100 | 0 | 1 | 353 | 2608354 | 2608002 | Stutzerimonas stutzeri strain CSW02 chromosome, complete genome | blastn | 135183 | 652 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Stutzerimonas | Stutzerimonas stutzeri | ||
| 7865885 | 7865885 | PRJNA1108009_P_NODE_27927_length_246_cov_1.433526_g27609_i0 | PRJNA1108009 | 27927 | 246 | 1.433526 | 3.52647396 | Pseudomonas tructae | 2518644 | Bacteria | Bacteria | 392 | 1.15e-104 | NTclustered | gi|1576849354|gb|CP035952.1| | 2518644 | g27609 | i0 | 95.51 | 97.6747967479675 | 245 | 11 | 99 | 0 | 1 | 245 | 901501 | 901745 | Pseudomonas tructae strain SNU WT1 chromosome, complete genome | blastn | 24028 | 392 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas tructae | ||
| 8673688 | 8673688 | PRJNA1108009_P_NODE_19787_length_289_cov_1.328704_g19469_i0 | PRJNA1108009 | 19787 | 289 | 1.328704 | 3.83995456 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 529 | 1.01e-145 | NTclustered | gi|2211724983|gb|CP066839.1| | 562 | g19469 | i0 | 99.654 | 103.951557093426 | 289 | 1 | 100 | 0 | 1 | 289 | 2082639 | 2082927 | Escherichia coli strain Ec-RL2-1X chromosome, complete genome | blastn | 30042 | 529 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 8673722 | 8673722 | PRJNA1108009_P_NODE_27667_length_247_cov_0.885057_g27349_i0 | PRJNA1108009 | 27667 | 247 | 0.885057 | 2.18609079 | Acinetobacter | 469 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2321448847|gb|CP107616.1| | 470 | g27349 | i0 | 100 | 11.8744939271255 | 28 | 0 | 11 | 0 | 195 | 222 | 1307973 | 1308000 | Acinetobacter baumannii strain 1326932 chromosome, complete genome | blastn | 2933 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter baumannii | ||
| 9140680 | 9140680 | PRJNA1108009_P_NODE_25628_length_250_cov_0.870056_g25310_i0 | PRJNA1108009 | 25628 | 250 | 0.870056 | 2.17514 | Shewanella livingstonensis | 150120 | Bacteria | Bacteria | 63.9 | 1.05e-5 | NTclustered | gi|1526122954|gb|CP034015.1| | 150120 | g25310 | i0 | 88.889 | 12.936 | 54 | 3 | 20 | 2 | 9 | 59 | 3962266 | 3962319 | Shewanella livingstonensis strain LMG 19866 chromosome, complete genome | blastn | 3234 | 63.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Alteromonadales | Shewanellaceae | Shewanella | Shewanella livingstonensis | ||
| 9948621 | 9948621 | PRJNA1108009_P_NODE_13948_length_354_cov_0.957295_g13630_i0 | PRJNA1108009 | 13948 | 354 | 0.957295 | 3.3888243 | Neisseriaceae | 481 | Bacteria | Bacteria | 643 | 4.3399999999999985e-180 | NTclustered | gi|1633799129|gb|CP039886.1| | 484 | g13630 | i0 | 99.435 | 347.991525423729 | 354 | 2 | 100 | 0 | 1 | 354 | 126397 | 126044 | Neisseria flavescens strain ATCC 13120 chromosome, complete genome | blastn | 123189 | 643 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Neisseriaceae | Neisseria | Neisseria flavescens | ||
| 11223923 | 11223923 | PRJNA1108009_P_NODE_30829_length_242_cov_0.911243_g30511_i0 | PRJNA1108009 | 30829 | 242 | 0.911243 | 2.20520806 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g30511 | i0 | 100 | 100 | 242 | 0 | 100 | 0 | 1 | 242 | 4561966 | 4562207 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 24200 | 448 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 12499348 | 12499348 | PRJNA1108009_P_NODE_27730_length_247_cov_0.885057_g27412_i0 | PRJNA1108009 | 27730 | 247 | 0.885057 | 2.18609079 | Escherichia | 561 | Bacteria | Bacteria | 457 | 4.05e-124 | NTclustered | gi|2483364719|emb|OX460336.1| | 562 | g27412 | i0 | 100 | 100 | 247 | 0 | 100 | 0 | 1 | 247 | 3411337 | 3411583 | Escherichia coli strain EC0026B genome assembly, chromosome: 1 | blastn | 24700 | 457 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 12499352 | 12499352 | PRJNA1108009_P_NODE_28530_length_246_cov_0.890173_g28212_i0 | PRJNA1108009 | 28530 | 246 | 0.890173 | 2.18982558 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 453 | 5.2100000000000006e-123 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g28212 | i0 | 100 | 99.7235772357724 | 245 | 0 | 99 | 0 | 1 | 245 | 984810 | 985054 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 24532 | 453 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 13773794 | 13773794 | PRJNA1108009_P_NODE_27431_length_247_cov_0.885057_g27113_i0 | PRJNA1108009 | 27431 | 247 | 0.885057 | 2.18609079 | Escherichia | 561 | Bacteria | Bacteria | 457 | 4.05e-124 | NTclustered | gi|2841922414|gb|CP163901.1| | 562 | g27113 | i0 | 100 | 198.676113360324 | 247 | 0 | 100 | 0 | 1 | 247 | 2710734 | 2710488 | Escherichia coli strain OXEC-129 chromosome, complete genome | blastn | 49073 | 457 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 13773807 | 13773807 | PRJNA1108009_P_NODE_30751_length_242_cov_0.911243_g30433_i0 | PRJNA1108009 | 30751 | 242 | 0.911243 | 2.20520806 | Escherichia | 561 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|2211724983|gb|CP066839.1| | 562 | g30433 | i0 | 100 | 100 | 242 | 0 | 100 | 0 | 1 | 242 | 2066372 | 2066131 | Escherichia coli strain Ec-RL2-1X chromosome, complete genome | blastn | 24200 | 448 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 15048267 | 15048267 | PRJNA1108009_P_NODE_9412_length_443_cov_4.024324_g9094_i0 | PRJNA1108009 | 9412 | 443 | 4.024324 | 17.82775532 | Acinetobacter | 469 | Bacteria | Bacteria | 819 | 0 | NTclustered | gi|1588041121|gb|CP037424.1| | 40214 | g9094 | i0 | 100 | 693.900677200903 | 443 | 0 | 100 | 0 | 1 | 443 | 3700507 | 3700065 | Acinetobacter johnsonii strain M19 chromosome, complete genome | blastn | 307398 | 819 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 16323005 | 16323005 | PRJNA1108009_P_NODE_20733_length_282_cov_1.105263_g20415_i0 | PRJNA1108009 | 20733 | 282 | 1.105263 | 3.11684166 | root | 1 | Root_unresolved | Root_unresolved | 521 | 1.6499999999999996e-143 | NTclustered | gi|2706519156|gb|CP149578.1| | 287 | g20415 | i0 | 100 | 101 | 282 | 0 | 100 | 0 | 1 | 282 | 6007982 | 6007701 | Mutant Pseudomonas aeruginosa isolate FELIX_MS413, complete genome | blastn | 28482 | 521 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 16323009 | 16323009 | PRJNA1108009_P_NODE_21073_length_279_cov_1.359223_g20755_i0 | PRJNA1108009 | 21073 | 279 | 1.359223 | 3.79223217 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 516 | 7.58e-142 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g20755 | i0 | 100 | 100 | 279 | 0 | 100 | 0 | 1 | 279 | 2864361 | 2864639 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 27900 | 516 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 16323017 | 16323017 | PRJNA1108009_P_NODE_23353_length_261_cov_0.941489_g23035_i0 | PRJNA1108009 | 23353 | 261 | 0.941489 | 2.45728629 | Escherichia | 561 | Bacteria | Bacteria | 472 | 1.54e-128 | NTclustered | gi|2211724983|gb|CP066839.1| | 562 | g23035 | i0 | 99.234 | 100 | 261 | 2 | 100 | 0 | 1 | 261 | 3740883 | 3740623 | Escherichia coli strain Ec-RL2-1X chromosome, complete genome | blastn | 26100 | 472 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 16790304 | 16790304 | PRJNA1108009_P_NODE_30294_length_243_cov_0.905882_g29976_i0 | PRJNA1108009 | 30294 | 243 | 0.905882 | 2.20129326 | uncultured Gammaproteobacteria bacterium | 86473 | Bacteria | Bacteria | 255 | 1.5600000000000001e-63 | NTclustered | gi|2874253752|emb|OY969692.1| | 86473 | g29976 | i0 | 85.656 | 119.567901234568 | 244 | 33 | 100 | 2 | 1 | 243 | 414265 | 414507 | MAG: uncultured Gammaproteobacteria bacterium isolate MFD05377.bin.2.4 genome assembly, chromosome: 1 | blastn | 29055 | 255 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | uncultured Gammaproteobacteria bacterium | |||||
| 18064332 | 18064332 | PRJNA1108009_P_NODE_11195_length_401_cov_0.939024_g10877_i0 | PRJNA1108009 | 11195 | 401 | 0.939024 | 3.76548624 | Methylophilus sp. DW102 | 3095607 | Bacteria | Bacteria | 725 | 0 | NTclustered | gi|2631712142|dbj|AP029023.1| | 3095607 | g10877 | i0 | 99.252 | 111.798004987531 | 401 | 3 | 100 | 0 | 1 | 401 | 174458 | 174858 | Methylophilus sp. DW102 DNA, complete genome | blastn | 44831 | 725 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Methylophilaceae | Methylophilus | Methylophilus sp. DW102 | ||
| 18872143 | 18872143 | PRJNA1108009_P_NODE_8995_length_455_cov_1.685864_g8677_i0 | PRJNA1108009 | 8995 | 455 | 1.685864 | 7.6706812 | Erythrobacteraceae | 335929 | Bacteria | Bacteria | 824 | 0 | NTclustered | gi|1036419962|gb|CP016033.1| | 1112 | g8677 | i0 | 99.341 | 121.006593406593 | 455 | 3 | 100 | 0 | 1 | 455 | 194624 | 195078 | Erythrobacter neustonensis strain DSM 9434 chromosome, complete genome | blastn | 55058 | 824 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Erythrobacteraceae | Erythrobacter | Erythrobacter neustonensis | ||
| 20146844 | 20146844 | PRJNA1108009_P_NODE_18156_length_305_cov_0.995690_g17838_i0 | PRJNA1108009 | 18156 | 305 | 0.99569 | 3.0368545 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 52.8 | 0.028 | NTclustered | gi|1789823089|dbj|AP019661.1| | 1131610 | g17838 | i0 | 100 | 0.275409836065574 | 28 | 0 | 9 | 0 | 35 | 62 | 151990 | 151963 | Vibrio zhuhaiensis DSM 25602 DNA, chromosome 2, complete sequence | blastn | 84 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio zhuhaiensis | ||
| 21422529 | 21422529 | PRJNA1108009_P_NODE_22357_length_269_cov_0.882653_g22039_i0 | PRJNA1108009 | 22357 | 269 | 0.882653 | 2.37433657 | Escherichia | 561 | Bacteria | Bacteria | 287 | 6.21e-73 | NTclustered | gi|2472161058|dbj|AP025751.1| | 2509664 | g22039 | i0 | 86.09 | 86.182156133829 | 266 | 37 | 99 | 0 | 1 | 266 | 722756 | 723021 | Escherichia sp. HH154_1D DNA, complete genome | blastn | 23183 | 287 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia sp. HH154_1D | ||
| 21422560 | 21422560 | PRJNA1108009_P_NODE_28477_length_246_cov_0.890173_g28159_i0 | PRJNA1108009 | 28477 | 246 | 0.890173 | 2.18982558 | Pseudomonas | 286 | Bacteria | Bacteria | 444 | 3.14e-120 | NTclustered | gi|2528375798|gb|CP123067.1| | 1876757 | g28159 | i0 | 99.187 | 100 | 246 | 2 | 100 | 0 | 1 | 246 | 4946082 | 4946327 | Pseudomonas defluvii strain K4-sn1399 chromosome, complete genome | blastn | 24600 | 444 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas defluvii | ||
| 21889941 | 21889941 | PRJNA1108009_P_NODE_29218_length_245_cov_0.895349_g28900_i0 | PRJNA1108009 | 29218 | 245 | 0.895349 | 2.19360505 | Jannaschia sp. M317 | 2867011 | Bacteria | Bacteria | 111 | 3.6e-20 | NTclustered | gi|2299577825|gb|CP081155.1| | 2867011 | g28900 | i0 | 91.358 | 3.97959183673469 | 81 | 7 | 33 | 0 | 11 | 91 | 1312692 | 1312772 | Jannaschia sp. M317 chromosome, complete genome | blastn | 975 | 111 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Roseobacteraceae | Jannaschia | Jannaschia sp. M317 | ||
| 23165705 | 23165705 | PRJNA1108009_P_NODE_9679_length_436_cov_1.380165_g9361_i0 | PRJNA1108009 | 9679 | 436 | 1.380165 | 6.0175194 | Rheinheimera sp. MM224 | 3019969 | Bacteria | Bacteria | 806 | 0 | NTclustered | gi|2321869226|emb|OX352320.1| | 3019969 | g9361 | i0 | 100 | 858.646788990826 | 436 | 0 | 100 | 0 | 1 | 436 | 40013 | 39578 | Rheinheimera sp. isolate Rheinheimera MM224 assembly genome assembly, chromosome: MM224 | blastn | 374370 | 806 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Chromatiaceae | Rheinheimera | Rheinheimera sp. MM224 | ||
| 24439073 | 24439073 | PRJNA1108009_P_NODE_30060_length_243_cov_0.905882_g29742_i0 | PRJNA1108009 | 30060 | 243 | 0.905882 | 2.20129326 | uncultured Alphaproteobacteria bacterium | 91750 | Bacteria | Bacteria | 178 | 3.4599999999999993e-40 | NTclustered | gi|2729058720|emb|OZ007020.1| | 91750 | g29742 | i0 | 80.952 | 0.950617283950617 | 231 | 39 | 95 | 3 | 14 | 243 | 618452 | 618226 | MAG: uncultured Alphaproteobacteria bacterium isolate 6730_HET_VAC_contig_11916_metaflye_circ MAG genome assembly, chromosome: 1 | blastn | 231 | 178 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | uncultured Alphaproteobacteria bacterium | |||||
| 25246853 | 25246853 | PRJNA1108009_P_NODE_20380_length_284_cov_2.042654_g20062_i0 | PRJNA1108009 | 20380 | 284 | 2.042654 | 5.80113736 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 525 | 1.2899999999999994e-144 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g20062 | i0 | 100 | 100 | 284 | 0 | 100 | 0 | 1 | 284 | 4599005 | 4598722 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 28400 | 525 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 25246858 | 25246858 | PRJNA1108009_P_NODE_21620_length_275_cov_1.099010_g21302_i0 | PRJNA1108009 | 21620 | 275 | 1.09901 | 3.0222775 | Comamonas | 283 | Bacteria | Bacteria | 401 | 2.1799999999999995e-107 | NTclustered | gi|2452164194|gb|CP090445.1| | 285 | g21302 | i0 | 99.545 | 334.058181818182 | 220 | 1 | 80 | 0 | 56 | 275 | 557007 | 556788 | Comamonas testosteroni strain X13 chromosome, complete genome | blastn | 91866 | 401 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | Comamonas testosteroni | ||
| 25246878 | 25246878 | PRJNA1108009_P_NODE_26000_length_249_cov_0.875000_g25682_i0 | PRJNA1108009 | 26000 | 249 | 0.875 | 2.17875 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g25682 | i0 | 100 | 100 | 249 | 0 | 100 | 0 | 1 | 249 | 342606 | 342854 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 24900 | 460 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 25246883 | 25246883 | PRJNA1108009_P_NODE_27000_length_248_cov_0.880000_g26682_i0 | PRJNA1108009 | 27000 | 248 | 0.88 | 2.1824 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 459 | 1.13e-124 | NTclustered | gi|2161252967|gb|CP088071.1| | 562 | g26682 | i0 | 100 | 100 | 248 | 0 | 100 | 0 | 1 | 248 | 1957554 | 1957307 | Escherichia coli strain 427603 chromosome, complete genome | blastn | 24800 | 459 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 25246905 | 25246905 | PRJNA1108009_P_NODE_31960_length_236_cov_2.601227_g31642_i0 | PRJNA1108009 | 31960 | 236 | 2.601227 | 6.13889572 | Brevundimonas | 41275 | Bacteria | Bacteria | 425 | 1.08e-114 | NTclustered | gi|2210243209|gb|CP073063.1| | 293 | g31642 | i0 | 99.153 | 178.627118644068 | 236 | 2 | 100 | 0 | 1 | 236 | 301645 | 301880 | Brevundimonas diminuta strain KX-1 chromosome, complete genome | blastn | 42156 | 425 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Brevundimonas | Brevundimonas diminuta |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;