RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1108009" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1108009 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6591456 6591456 PRJNA1108009_P_NODE_8546_length_468_cov_2.308861_g8229_i0 PRJNA1108009 8546 468 2.308861 10.80546948 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 54.7 0.013   NTclustered gi|1191051559|ref|XM_021047964.1| 2652724 g8229 i0 100 0.061965811965812 29 0 6 0 18 46 3846 3818 PREDICTED: Exaiptasia diaphana monocarboxylate transporter 10 (LOC110242031), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
25246831 25246831 PRJNA1108009_P_NODE_15540_length_333_cov_1.403846_g15222_i0 PRJNA1108009 15540 333 1.403846 4.67480718 Metazoa 33208 Cnidaria other_Eukaryota 231 3.76e-56   NTclustered gi|1603784359|ref|XM_028539698.1| 151771 g15222 i0 79.456 94.5885885885886 331 64 99 4 3 331 1168 840 PREDICTED: Dendronephthya gigantea actin, cytoplasmic-like (LOC114519547), mRNA blastn 31498 231 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;