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contig_metadata

24 rows where analysis = "blastn", bioproject = "PRJNA1108009" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 24 ✖

tax_clade 1

bioproject 1

  • PRJNA1108009 · 24 ✖

analysis 1

  • blastn · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
212818 212818 PRJNA1108009_P_NODE_16341_length_324_cov_1.378486_g16023_i0 PRJNA1108009 16341 324 1.378486 4.46629464 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 427 4.33e-115   NTclustered gi|300521444|gb|GQ377690.1| 151077 g16023 i0 90.654 9.02777777777778 321 30 99 0 4 324 821 501 Chilodonella uncinata 14-3-3 protein-like mRNA, partial sequence blastn 2925 427 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
1487457 1487457 PRJNA1108009_P_NODE_14502_length_347_cov_0.996350_g14184_i0 PRJNA1108009 14502 347 0.99635 3.4573345 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 407 6.09e-109   NTclustered gi|298497487|gb|GQ465330.1| 151077 g14184 i0 96.735 84.0432276657061 245 7 96 1 1 245 428 671 Chilodonella uncinata strain Poland clone shared_p1 beta-tubulin gene, partial cds; micronuclear blastn 29163 407 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
1487838 1487838 PRJNA1108009_P_NODE_30162_length_243_cov_0.905882_g29844_i0 PRJNA1108009 30162 243 0.905882 2.20129326 Parafurgasonia sp. FG-2015 1607891 SAR_Eukaryotes SAR_Eukaryotes 233 7.289999999999999e-57   NTclustered gi|759083542|gb|KM222159.1| 1607891 g29844 i0 85.903 94.2469135802469 227 23 92 7 20 243 1738 1518 Parafurgasonia sp. FG-2015 voucher FXP_S011 large subunit ribosomal RNA gene, partial sequence blastn 22902 233 1 Eukaryota Sar   Ciliophora Nassophorea Nassulida Furgasoniidae Parafurgasonia Parafurgasonia sp. FG-2015
1488051 1488051 PRJNA1108009_P_NODE_962_length_1282_cov_5.093466_g685_i2 PRJNA1108009 962 1282 5.093466 65.29823412 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 1910 0   NTclustered gi|110645063|gb|DQ665311.1| 151077 g685 i2 95.274 45.792511700468 1206 55 94 2 50 1254 1 1205 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 58706 1910 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
1488054 1488054 PRJNA1108009_P_NODE_9702_length_435_cov_2.179558_g9384_i0 PRJNA1108009 9702 435 2.179558 9.4810773 Tetmemena sp. Y1 1640447 SAR_Eukaryotes SAR_Eukaryotes 370 1.02e-97   NTclustered gi|1227052606|gb|KY038460.1| 1640447 g9384 i0 82.892 89.4597701149425 415 67 95 3 9 421 413 1 Tetmemena sp. Y1 heat shock protein 70 (hsp70) gene, partial cds; macronuclear blastn 38915 370 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Tetmemena Tetmemena sp. Y1
4040013 4040013 PRJNA1108009_P_NODE_3484_length_747_cov_1.415430_g3194_i0 PRJNA1108009 3484 747 1.41543 10.573262100000001 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 684 0   NTclustered gi|829160170|ref|XM_001012263.3| 312017 g3194 i0 83.333 89.7804551539491 750 115 99 10 1 745 1324 580 Tetrahymena thermophila SB210 heat shock 70 kDa protein partial mRNA blastn 67066 684 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
5316030 5316030 PRJNA1108009_P_NODE_2825_length_822_cov_1.769025_g2556_i0 PRJNA1108009 2825 822 1.769025 14.5413855 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 1408 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g2556 i0 97.567 57.2980535279805 822 20 100 0 1 822 2318 1497 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 47099 1408 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
11691676 11691676 PRJNA1108009_P_NODE_22190_length_270_cov_1.172589_g21872_i0 PRJNA1108009 22190 270 1.172589 3.1659903 Colpoda inflata 5980 SAR_Eukaryotes SAR_Eukaryotes 383 7.73e-102   NTclustered gi|4063575|gb|AF056098.1|AF056098 5980 g21872 i0 92.222 77.5185185185185 270 21 100 0 1 270 750 481 Colpoda inflata translation elongation factor 1-alpha (TEF1) gene, partial cds blastn 20930 383 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda inflata
12499304 12499304 PRJNA1108009_P_NODE_16590_length_321_cov_1.806452_g16272_i0 PRJNA1108009 16590 321 1.806452 5.79871092 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 122 2.26e-23   NTclustered gi|315570348|tpg|BK007936.1| 5911 g16272 i0 83.459 0.828660436137072 133 20 41 2 157 288 132 1 TPA_exp: Tetrahymena thermophila 40S ribosomal protein rpS29e mRNA, complete cds blastn 266 122 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
12966892 12966892 PRJNA1108009_P_NODE_24711_length_251_cov_0.865169_g24393_i0 PRJNA1108009 24711 251 0.865169 2.17157419 Isotricha intestinalis 47897 SAR_Eukaryotes SAR_Eukaryotes 255 1.62e-63   NTclustered gi|92790151|emb|AJ965261.1| 47897 g24393 i0 87.963 125.091633466135 216 26 86 0 36 251 916 701 Isotricha intestinalis partial mRNA for Polyubiqutin 1 (polyubiqutin 1 gene) blastn 31398 255 1 Eukaryota Sar   Ciliophora Litostomatea Vestibuliferida Isotrichidae Isotricha Isotricha intestinalis
12967219 12967219 PRJNA1108009_P_NODE_911_length_1305_cov_5.115260_g685_i1 PRJNA1108009 911 1305 5.11526 66.754143 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 2021 0   NTclustered gi|110645063|gb|DQ665311.1| 151077 g685 i1 96.929 43.8 1205 37 92 0 50 1254 1 1205 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 57159 2021 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
14241598 14241598 PRJNA1108009_P_NODE_15052_length_340_cov_0.902622_g14734_i0 PRJNA1108009 15052 340 0.902622 3.0689148 Sterkiella nova 200597 SAR_Eukaryotes SAR_Eukaryotes 204 8.38e-48   NTclustered gi|1051275|gb|U37280.1|ONU37280 200597 g14734 i0 77.778 62.1117647058824 342 68 99 8 2 339 1977 1640 Oxytricha nova Hsp70 gene, complete cds blastn 21118 204 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Sterkiella Sterkiella nova
14242147 14242147 PRJNA1108009_P_NODE_852_length_1338_cov_6.203162_g685_i0 PRJNA1108009 852 1338 6.203162 82.99830756 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 1871 0   NTclustered gi|110645063|gb|DQ665311.1| 151077 g685 i0 94.689 43.3916292974589 1205 64 90 0 50 1254 1 1205 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 58058 1871 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
15515397 15515397 PRJNA1108009_P_NODE_14713_length_344_cov_1.339483_g14395_i0 PRJNA1108009 14713 344 1.339483 4.60782152 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 486 7.529999999999999e-133   NTclustered gi|110645006|gb|DQ665938.1| 151077 g14395 i0 92.151 11.4796511627907 344 27 100 0 1 344 757 414 Chilodonella uncinata actin gene, partial cds; macronuclear blastn 3949 486 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
21889573 21889573 PRJNA1108009_P_NODE_14878_length_342_cov_1.115242_g14560_i0 PRJNA1108009 14878 342 1.115242 3.81412764 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 226 1.8e-54   NTclustered gi|584458848|gb|KJ159074.1| 5949 g14560 i0 80.259 113.526315789474 309 53 89 8 2 306 853 1157 Stylonychia lemnae histone variant H3.1 (HIS31) gene, complete cds; macronuclear blastn 38826 226 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
21889690 21889690 PRJNA1108009_P_NODE_19578_length_291_cov_1.091743_g19260_i0 PRJNA1108009 19578 291 1.091743 3.17697213 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 444 3.8099999999999997e-120   NTclustered gi|158347525|gb|EU047814.1| 151077 g19260 i0 94.158 99.0721649484536 291 17 100 0 1 291 689 399 Chilodonella uncinata clone Shared_P1 beta-tubulin gene, partial cds; macronuclear blastn 28830 444 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
22697446 22697446 PRJNA1108009_P_NODE_20378_length_284_cov_2.137441_g20060_i0 PRJNA1108009 20378 284 2.137441 6.07033244 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 230 1.1299999999999995e-55   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g20060 i0 97.059 1.43661971830986 136 4 48 0 1 136 2947 3082 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 408 230 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
23164975 23164975 PRJNA1108009_P_NODE_11539_length_394_cov_1.386293_g11221_i0 PRJNA1108009 11539 394 1.386293 5.46199442 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 645 1.3599999999999996e-180   NTclustered gi|110277428|gb|DQ662856.1| 151077 g11221 i0 96.193 59.7969543147208 394 15 100 0 1 394 1475 1082 Chilodonella uncinata heat shock protein 90 gene, partial cds; macronuclear blastn 23560 645 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
23165035 23165035 PRJNA1108009_P_NODE_13379_length_362_cov_2.128028_g13061_i0 PRJNA1108009 13379 362 2.128028 7.70346136 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 592 1.6399999999999999e-164   NTclustered gi|301014695|gb|GQ377692.1| 151077 g13061 i0 96.133 13.1187845303867 362 14 100 0 1 362 383 22 Chilodonella uncinata ribosomal protein S23a-like (rps23a) mRNA, complete sequence blastn 4749 592 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
23165038 23165038 PRJNA1108009_P_NODE_13499_length_361_cov_0.795139_g13181_i0 PRJNA1108009 13499 361 0.795139 2.87045179 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 222 2.46e-53   NTclustered gi|829192616|ref|XM_001029813.3| 312017 g13181 i0 78.056 2.64819944598338 360 73 99 6 1 357 357 1 Tetrahymena thermophila SB210 60S ribosomal protein L15 partial mRNA blastn 956 222 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
23165496 23165496 PRJNA1108009_P_NODE_31279_length_241_cov_1.839286_g30961_i0 PRJNA1108009 31279 241 1.839286 4.43267926 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 446 8.519999999999999e-121   NTclustered gi|13194559|gb|AF300281.1|AF300281 151077 g30961 i0 100 98.8340248962656 241 0 100 0 1 241 17 257 Chilodonella uncinata clone 1 18S small subunit ribosomal RNA gene, partial sequence blastn 23819 446 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
24438911 24438911 PRJNA1108009_P_NODE_23000_length_263_cov_3.326316_g22682_i0 PRJNA1108009 23000 263 3.326316 8.74821108 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 475 1.2e-129   NTclustered gi|1389430803|gb|MH341631.1| 1938391 g22682 i0 99.24 100.532319391635 263 2 100 0 1 263 670 932 Chilodonella hexasticha strain C. hexasticha SC large subunit ribosomal RNA gene, partial sequence blastn 26440 475 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
24438938 24438938 PRJNA1108009_P_NODE_24140_length_254_cov_2.320442_g23822_i0 PRJNA1108009 24140 254 2.320442 5.89392268 Sorogena stoianovitchae 164621 SAR_Eukaryotes SAR_Eukaryotes 320 5.73e-83   NTclustered gi|169659247|dbj|AB325967.1| 164621 g23822 i0 90.496 96.4763779527559 242 23 95 0 3 244 699 458 Sorogena stoianovitchae sbt mRNA for putative beta-tubulin, partial cds blastn 24505 320 1 Eukaryota Sar   Ciliophora Colpodea Sorogenida Sorogenidae Sorogena Sorogena stoianovitchae
24439293 24439293 PRJNA1108009_P_NODE_9780_length_433_cov_4.902778_g9462_i0 PRJNA1108009 9780 433 4.902778 21.22902874 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 617 3.29e-172   NTclustered gi|300676719|gb|GQ377693.1| 151077 g9462 i0 92.379 58.6836027713626 433 33 100 0 1 433 60 492 Chilodonella uncinata gcr5-like mRNA, partial sequence blastn 25410 617 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;