RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA1105232" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1105232 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1487283 1487283 PRJNA1105232_S_NODE_5982_length_247_cov_1.626263_g5766_i0 PRJNA1105232 5982 247 1.626263 4.01686961 Radiomyces spectabilis 64574 Fungi Fungi 193 1.26e-44   NTclustered gi|2323713626|ref|XM_051567288.1| 64574 g5766 i0 82.511 7.07692307692308 223 35 89 4 20 240 374 154 Radiomyces spectabilis 40S ribosomal protein S13 (BYT42DRAFT_560860), mRNA blastn 1748 193 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Radiomycetaceae Radiomyces Radiomyces spectabilis
6590641 6590641 PRJNA1105232_S_NODE_10746_length_196_cov_1.061224_g10530_i0 PRJNA1105232 10746 196 1.061224 2.07999904 Rhizopus microsporus 58291 Fungi Fungi 143 9.779999999999999e-30   NTclustered gi|1331202685|ref|XM_023614587.1| 1340429 g10530 i0 83.66 10.7908163265306 153 23 78 2 29 180 1066 1217 Rhizopus microsporus ATCC 52813 TIP49-domain-containing protein (RHIMIDRAFT_309081), mRNA blastn 2115 143 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus
14241404 14241404 PRJNA1105232_S_NODE_2112_length_368_cov_1.956113_g1896_i0 PRJNA1105232 2112 368 1.956113 7.19849584 Phycomyces blakesleeanus 4837 Fungi Fungi 87.9 9.58e-13   NTclustered gi|1069965094|ref|XM_018440173.1| 763407 g1896 i0 86.25 4.29347826086957 80 11 22 0 51 130 1082 1161 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 1580 87.9 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
23164864 23164864 PRJNA1105232_S_NODE_18639_length_152_cov_34.339806_g18423_i0 PRJNA1105232 18639 152 34.339806 52.19650512 Mucor mucedo 29922 Fungi Fungi 58.4 2.67e-4   NTclustered gi|2324075884|ref|XM_051603668.1| 29922 g18423 i0 94.737 0.25 38 0 25 1 45 82 253 218 Mucor mucedo uncharacterized protein (EV154DRAFT_529412), mRNA blastn 38 58.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo
24438528 24438528 PRJNA1105232_S_NODE_7400_length_227_cov_2.337079_g7184_i0 PRJNA1105232 7400 227 2.337079 5.30516933 Rhizomucor pusillus 4840 Fungi Fungi 165 2.49e-36   NTclustered gi|2837722742|ref|XM_069386840.1| 4840 g7184 i0 89.313 1.95594713656388 131 14 58 0 57 187 2575 2445 Rhizomucor pusillus uncharacterized protein (VTP01DRAFT_7790), partial mRNA blastn 444 165 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;