RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA1105232" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA1105232 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2763280 2763280 PRJNA1105232_S_NODE_16743_length_164_cov_0.904348_g16527_i0 PRJNA1105232 16743 164 0.904348 1.48313072 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 167 4.689999999999999e-37   NTclustered gi|290986471|ref|XM_002675902.1| 5762 g16527 i0 86.275 12.4939024390244 153 21 93 0 6 158 835 987 Naegleria gruberi 26S proteosome subunit P45 (NAEGRDRAFT_37071), partial mRNA blastn 2049 167 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
4039361 4039361 PRJNA1105232_S_NODE_2284_length_358_cov_4.207120_g2068_i0 PRJNA1105232 2284 358 4.20712 15.0614896 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 150 1.1699999999999998e-31   NTclustered gi|290987009|ref|XM_002676170.1| 5762 g2068 i0 77.174 5.32402234636872 276 52 76 9 86 357 1490 1222 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_68607), partial mRNA blastn 1906 150 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6590672 6590672 PRJNA1105232_S_NODE_18606_length_153_cov_2.538462_g18390_i0 PRJNA1105232 18606 153 2.538462 3.88384686 soil amoeba AND9 328341 Heterolobosea other_Eukaryota 239 8.96e-59   NTclustered gi|65306218|gb|AY965861.1| 328341 g18390 i0 94.771 99.9673202614379 153 8 100 0 1 153 1490 1338 Soil amoeba AND9 18S ribosomal RNA gene, partial sequence blastn 15295 239 1 Eukaryota Discoba   Heterolobosea         soil amoeba AND9
7865290 7865290 PRJNA1105232_S_NODE_13487_length_178_cov_1.193798_g13271_i0 PRJNA1105232 13487 178 1.193798 2.12496044 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 108 3.17e-19   NTclustered gi|2119442003|ref|XM_044695421.1| 51637 g13271 i0 79.355 0.870786516853933 155 30 87 2 3 156 956 1109 Naegleria lovaniensis uncharacterized protein (C9374_005648), partial mRNA blastn 155 108 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
10416003 10416003 PRJNA1105232_S_NODE_1509_length_417_cov_14.858696_g1294_i0 PRJNA1105232 1509 417 14.858696 61.96076232 Neovahlkampfia nana 1869201 Heterolobosea other_Eukaryota 388 2.6899999999999996e-103   NTclustered gi|1042160970|dbj|LC126929.1| 1869201 g1294 i0 87.464 80.8609112709832 343 35 81 6 1 336 1746 2087 Neovahlkampfia nana gene for 18S ribosomal RNA, partial sequence, isolate: I_13 blastn 33719 388 1 Eukaryota Discoba   Heterolobosea     Neovahlkampfiidae Neovahlkampfia Neovahlkampfia nana
10416032 10416032 PRJNA1105232_S_NODE_3569_length_303_cov_4.944882_g3353_i0 PRJNA1105232 3569 303 4.944882 14.98299246 Stephanopogon apogon 238758 Heterolobosea other_Eukaryota 185 2.6699999999999994e-42   NTclustered gi|302026188|gb|GQ377679.1| 238758 g3353 i0 80.972 2.87458745874587 247 35 80 8 63 303 530 290 Stephanopogon apogon HSP90 gene, partial cds blastn 871 185 1 Eukaryota Discoba   Heterolobosea     Stephanopogonidae Stephanopogon Stephanopogon apogon
16789734 16789734 PRJNA1105232_S_NODE_294_length_883_cov_2.719424_g115_i0 PRJNA1105232 294 883 2.719424 24.01251392 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 248 1.06e-60   NTclustered gi|38606347|gb|AY376155.1| 51637 g115 i0 82.818 25.4518686296716 291 36 42 12 221 507 971 691 Naegleria lovaniensis isolate 7372 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 22474 248 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
22697370 22697370 PRJNA1105232_S_NODE_358_length_786_cov_20.074627_g174_i0 PRJNA1105232 358 786 20.074627 157.78656822 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 368 6.89e-97   NTclustered gi|65306218|gb|AY965861.1| 328341 g174 i0 94.191 38.236641221374 241 14 31 0 1 241 501 741 Soil amoeba AND9 18S ribosomal RNA gene, partial sequence blastn 30054 370 0.994594594594595 Eukaryota Discoba   Heterolobosea         soil amoeba AND9
23164846 23164846 PRJNA1105232_S_NODE_1379_length_431_cov_7.727749_g1165_i0 PRJNA1105232 1379 431 7.727749 33.30659819 Neovahlkampfia damariscottae 166956 Heterolobosea other_Eukaryota 150 1.43e-31   NTclustered gi|2874368068|gb|PQ819792.1| 166956 g1165 i0 89.916 3.60092807424594 119 8 27 3 315 431 394 510 Neovahlkampfia damariscottae strain CCAP:1588/7 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 1552 150 1 Eukaryota Discoba   Heterolobosea     Neovahlkampfiidae Neovahlkampfia Neovahlkampfia damariscottae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;