RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1105232" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1105232 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7865320 7865320 PRJNA1105232_S_NODE_2607_length_341_cov_2.349315_g2391_i0 PRJNA1105232 2607 341 2.349315 8.01116415 Dendronephthya gigantea 151771 Cnidaria other_Eukaryota 52.8 0.032   NTclustered gi|1603820535|ref|XM_028558927.1| 151771 g2391 i0 96.774 0.363636363636364 31 1 9 0 3 33 6201 6231 PREDICTED: Dendronephthya gigantea nuclear anchorage protein 1-like (LOC114537828), transcript variant X2, mRNA blastn 124 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea
9140155 9140155 PRJNA1105232_S_NODE_11128_length_193_cov_1.131944_g10912_i0 PRJNA1105232 11128 193 1.131944 2.18465192 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 56.5 0.001   NTclustered gi|2782931191|ref|XM_067074155.1| 252671 g10912 i0 94.444 0.186528497409326 36 2 19 0 1 36 620 655 PREDICTED: Clytia hemisphaerica ADP-ribosylation factor 2 (LOC136817831), mRNA blastn 36 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;