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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1105232" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 8 ✖

bioproject 1

  • PRJNA1105232 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5315472 5315472 PRJNA1105232_S_NODE_325_length_826_cov_25.505792_g142_i0 PRJNA1105232 325 826 25.505792 210.67784192 Vannella ebro 207334 Discosea other_Eukaryota 675 0   NTclustered gi|33946344|gb|AY294151.1| 207334 g142 i0 82.17 96.0520581113801 802 127 96 14 33 826 1137 344 Vannella ebro actin mRNA, complete cds blastn 79339 675 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella ebro
9140209 9140209 PRJNA1105232_S_NODE_6428_length_240_cov_2.146597_g6212_i0 PRJNA1105232 6428 240 2.146597 5.1518328 Dictyostelium purpureum 5786 Evosea other_Eukaryota 159 1.24e-34   NTclustered gi|330819061|ref|XM_003291536.1| 5786 g6212 i0 80.769 0.866666666666667 208 36 86 2 35 240 629 424 Dictyostelium purpureum cystathionine beta-synthase (DICPUDRAFT_49929), mRNA blastn 208 159 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
11691247 11691247 PRJNA1105232_S_NODE_10230_length_200_cov_1.377483_g10014_i0 PRJNA1105232 10230 200 1.377483 2.754966 Amoebozoa sp. Pa17 688082 Root_unresolved Root_unresolved 324 3.33e-84   NTclustered gi|407369295|emb|FN562418.1| 688082 g10014 i0 100 26.705 175 0 88 0 26 200 882 1056 Amoebozoa sp. Pa17 partial 18S rRNA gene, isolate Pa17 blastn 5341 324 1 Eukaryota Amoebozoa             Amoebozoa sp. Pa17
15048109 15048109 PRJNA1105232_S_NODE_2012_length_375_cov_6.245399_g1796_i0 PRJNA1105232 2012 375 6.245399 23.42024625 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 680 0   NTclustered gi|441475833|emb|FN562425.4| 688089 g1796 i0 99.2 75.352 375 3 100 0 1 375 704 1078 Amoebozoa sp. SZA36 18S rRNA gene, isolate SZA36 blastn 28257 686 0.991253644314869 Eukaryota Amoebozoa             Amoebozoa sp. SZA36
15515187 15515187 PRJNA1105232_S_NODE_13413_length_178_cov_2.015504_g13197_i0 PRJNA1105232 13413 178 2.015504 3.58759712 Dictyostelium purpureum 5786 Evosea other_Eukaryota 176 8.56e-40   NTclustered gi|330798428|ref|XM_003287207.1| 5786 g13197 i0 85.465 16.5842696629213 172 21 96 4 9 178 1097 1266 Dictyostelium purpureum 26S proteasome subunit ATPase 5 (DICPUDRAFT_91882), mRNA blastn 2952 176 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
15515249 15515249 PRJNA1105232_S_NODE_9573_length_205_cov_7.544872_g9357_i0 PRJNA1105232 9573 205 7.544872 15.4669876 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 119 1.74e-22   NTclustered gi|470458047|ref|XM_004341152.1| 1257118 g9357 i0 90.11 12.3609756097561 91 9 44 0 1 91 141 231 Acanthamoeba castellanii str. Neff polyubiquitin, putative (ACA1_335920), partial mRNA blastn 2534 119 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19338455 19338455 PRJNA1105232_S_NODE_8856_length_212_cov_0.957055_g8640_i0 PRJNA1105232 8856 212 0.957055 2.0289566 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 111 3.03e-20   NTclustered gi|470526273|ref|XM_004356675.1| 1257118 g8640 i0 94.444 2.41981132075472 72 4 34 0 130 201 408 337 Acanthamoeba castellanii str. Neff ribosomal protein L19e, putative (ACA1_174910), partial mRNA blastn 513 111 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21889410 21889410 PRJNA1105232_S_NODE_5098_length_263_cov_3.126168_g4882_i0 PRJNA1105232 5098 263 3.126168 8.22182184 Tubulinea group 04 sp. CAL5 1215995 Tubulinea other_Eukaryota 486 5.5499999999999986e-133   NTclustered gi|399764275|gb|JQ271786.1| 1215995 g4882 i0 100 13.5703422053232 263 0 100 0 1 263 174 436 Tubulinea group 04 sp. CAL5 18S ribosomal RNA gene, partial sequence blastn 3569 486 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 04 sp. CAL5

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;