contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJNA1104180" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 212300 | 212300 | PRJNA1104180_P_NODE_15401_length_275_cov_1.524752_g15259_i0 | PRJNA1104180 | 15401 | 275 | 1.524752 | 4.193068 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 261 | 3.86e-65 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g15259 | i0 | 85.375 | 1.69818181818182 | 253 | 35 | 92 | 2 | 4 | 255 | 6125313 | 6125062 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 467 | 261 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 212336 | 212336 | PRJNA1104180_P_NODE_18021_length_261_cov_1.606383_g17879_i0 | PRJNA1104180 | 18021 | 261 | 1.606383 | 4.19265963 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 219 | 2.22e-52 | NTclustered | gi|816953346|gb|CP011125.1| | 927083 | g17879 | i0 | 82.171 | 84.9463601532567 | 258 | 43 | 99 | 3 | 1 | 258 | 5438128 | 5438382 | Sandaracinus amylolyticus strain DSM 53668, complete genome | blastn | 22171 | 219 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 1487146 | 1487146 | PRJNA1104180_P_NODE_3842_length_463_cov_4.307692_g3700_i0 | PRJNA1104180 | 3842 | 463 | 4.307692 | 19.94461396 | Archangium violaceum | 83451 | Bacteria | Bacteria | 845 | 0 | NTclustered | gi|2619762464|gb|CP137851.1| | 83451 | g3700 | i0 | 99.568 | 260.552915766739 | 463 | 2 | 100 | 0 | 1 | 463 | 8031524 | 8031986 | Archangium violaceum strain KYC5002 chromosome, complete genome | blastn | 120636 | 845 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum | ||
| 6590284 | 6590284 | PRJNA1104180_P_NODE_10666_length_310_cov_3.054852_g10524_i0 | PRJNA1104180 | 10666 | 310 | 3.054852 | 9.4700412 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 178 | 4.58e-40 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g10524 | i0 | 88.435 | 0.474193548387097 | 147 | 17 | 47 | 0 | 161 | 307 | 9638164 | 9638018 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 147 | 178 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 6590323 | 6590323 | PRJNA1104180_P_NODE_13766_length_285_cov_1.000000_g13624_i0 | PRJNA1104180 | 13766 | 285 | 1 | 2.85 | Pendulispora brunnea | 2905690 | Bacteria | Bacteria | 427 | 3.74e-115 | NTclustered | gi|2698055994|gb|CP089982.1| | 2905690 | g13624 | i0 | 93.993 | 174.382456140351 | 283 | 16 | 100 | 1 | 4 | 285 | 7408903 | 7408621 | Pendulispora brunnea strain MSr12523 chromosome, complete genome | blastn | 49699 | 427 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora brunnea | ||
| 7398185 | 7398185 | PRJNA1104180_P_NODE_8766_length_333_cov_3.376923_g8624_i0 | PRJNA1104180 | 8766 | 333 | 3.376923 | 11.24515359 | Myxococcia | 32015 | Bacteria | Bacteria | 346 | 1.2899999999999999e-90 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g8624 | i0 | 86.068 | 204.738738738739 | 323 | 37 | 97 | 2 | 10 | 332 | 3943954 | 3944268 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 68178 | 346 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 11691175 | 11691175 | PRJNA1104180_P_NODE_4630_length_428_cov_3.236620_g4488_i0 | PRJNA1104180 | 4630 | 428 | 3.23662 | 13.8527336 | Archangium violaceum | 83451 | Bacteria | Bacteria | 780 | 0 | NTclustered | gi|2619762464|gb|CP137851.1| | 83451 | g4488 | i0 | 99.533 | 358.084112149533 | 428 | 2 | 100 | 0 | 1 | 428 | 3535 | 3108 | Archangium violaceum strain KYC5002 chromosome, complete genome | blastn | 153260 | 780 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum | ||
| 12499152 | 12499152 | PRJNA1104180_P_NODE_2610_length_545_cov_3.730932_g2469_i0 | PRJNA1104180 | 2610 | 545 | 3.730932 | 20.3335794 | Archangiaceae | 39 | Bacteria | Bacteria | 431 | 5.889999999999998e-116 | NTclustered | gi|2579656172|gb|CP043491.1| | 43 | g2469 | i0 | 81.204 | 236.611009174312 | 548 | 91 | 100 | 10 | 1 | 545 | 395989 | 396527 | Cystobacter fuscus strain Cbf 10 chromosome, complete genome | blastn | 128953 | 431 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Cystobacter | Cystobacter fuscus | ||
| 14241115 | 14241115 | PRJNA1104180_P_NODE_18492_length_258_cov_4.227027_g18350_i0 | PRJNA1104180 | 18492 | 258 | 4.227027 | 10.90572966 | Cystobacter fuscus | 43 | Bacteria | Bacteria | 455 | 1.53e-123 | NTclustered | gi|2579665545|gb|CP043492.1| | 43 | g18350 | i0 | 98.45 | 307.437984496124 | 258 | 4 | 100 | 0 | 1 | 258 | 4450770 | 4450513 | Cystobacter fuscus strain Cbf 8 chromosome, complete genome | blastn | 79319 | 455 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Cystobacter | Cystobacter fuscus | ||
| 15514992 | 15514992 | PRJNA1104180_P_NODE_21753_length_248_cov_2.337143_g21610_i0 | PRJNA1104180 | 21753 | 248 | 2.337143 | 5.79611464 | Sorangium cellulosum | 56 | Bacteria | Bacteria | 270 | 5.69e-68 | NTclustered | gi|161158851|emb|AM746676.1| | 448385 | g21610 | i0 | 86.454 | 99.2137096774194 | 251 | 28 | 100 | 6 | 1 | 248 | 12571360 | 12571607 | Sorangium cellulosum 'So ce 56' complete genome | blastn | 24605 | 270 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 16789528 | 16789528 | PRJNA1104180_P_NODE_2354_length_571_cov_42.100402_g2213_i0 | PRJNA1104180 | 2354 | 571 | 42.100402 | 240.39329542 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 320 | 1.3999999999999995e-82 | NTclustered | gi|2258824976|gb|CP060221.1| | 2026763 | g2213 | i0 | 77.738 | 128.325744308231 | 557 | 100 | 95 | 23 | 20 | 562 | 1314236 | 1313690 | MAG: Myxococcales bacterium isolate HK-STAS-MYXO-35 chromosome, complete genome | blastn | 73274 | 320 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 16789572 | 16789572 | PRJNA1104180_P_NODE_26454_length_241_cov_0.916667_g26311_i0 | PRJNA1104180 | 26454 | 241 | 0.916667 | 2.20916747 | Corallococcus sp. EGB | 1521117 | Bacteria | Bacteria | 147 | 9.67e-31 | NTclustered | gi|2094564806|gb|CP079946.1| | 1521117 | g26311 | i0 | 79.07 | 4.50207468879668 | 215 | 43 | 89 | 2 | 25 | 238 | 2692204 | 2692417 | Corallococcus sp. EGB chromosome, complete genome | blastn | 1085 | 147 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus sp. EGB | ||
| 18063989 | 18063989 | PRJNA1104180_P_NODE_16635_length_268_cov_2.297436_g16493_i0 | PRJNA1104180 | 16635 | 268 | 2.297436 | 6.15712848 | Sorangium cellulosum | 56 | Bacteria | Bacteria | 154 | 6.54e-33 | NTclustered | gi|520999024|gb|CP003969.1| | 1254432 | g16493 | i0 | 87.591 | 2.74253731343284 | 137 | 11 | 50 | 5 | 135 | 268 | 8570517 | 8570650 | Sorangium cellulosum So0157-2, complete genome | blastn | 735 | 154 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 18871815 | 18871815 | PRJNA1104180_P_NODE_12975_length_289_cov_1.680556_g12833_i0 | PRJNA1104180 | 12975 | 289 | 1.680556 | 4.85680684 | Polyangiaceae | 49 | Bacteria | Bacteria | 143 | 1.54e-29 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g12833 | i0 | 84.564 | 2.08304498269896 | 149 | 18 | 51 | 4 | 11 | 156 | 12079303 | 12079449 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 602 | 143 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 21889223 | 21889223 | PRJNA1104180_P_NODE_26138_length_241_cov_1.494048_g25995_i0 | PRJNA1104180 | 26138 | 241 | 1.494048 | 3.60065568 | Archangium gephyra | 48 | Bacteria | Bacteria | 180 | 9.539999999999999e-41 | NTclustered | gi|827418478|gb|CP011509.1| | 48 | g25995 | i0 | 82.439 | 5.47717842323651 | 205 | 36 | 85 | 0 | 29 | 233 | 9051437 | 9051233 | Archangium gephyra strain DSM 2261, complete genome | blastn | 1320 | 180 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 24438134 | 24438134 | PRJNA1104180_P_NODE_12060_length_296_cov_2.560538_g11918_i0 | PRJNA1104180 | 12060 | 296 | 2.560538 | 7.57919248 | Sorangium cellulosum | 56 | Bacteria | Bacteria | 97.1 | 1.25e-15 | NTclustered | gi|161158851|emb|AM746676.1| | 448385 | g11918 | i0 | 78.912 | 0.496621621621622 | 147 | 27 | 49 | 4 | 151 | 295 | 7668186 | 7668042 | Sorangium cellulosum 'So ce 56' complete genome | blastn | 147 | 97.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;