contig_metadata
21 rows where analysis = "blastn", bioproject = "PRJNA1104180" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 212484 | 212484 | PRJNA1104180_P_NODE_5481_length_399_cov_1.871166_g5339_i0 | PRJNA1104180 | 5481 | 399 | 1.871166 | 7.46595234 | Caulifigura coniformis | 2527983 | Bacteria | Bacteria | 719 | 0 | NTclustered | gi|1712508784|gb|CP036271.1| | 2527983 | g5339 | i0 | 99.246 | 111.809523809524 | 398 | 3 | 99 | 0 | 1 | 398 | 2926754 | 2927151 | Caulifigura coniformis strain Pan44 chromosome | blastn | 44612 | 719 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Caulifigura | Caulifigura coniformis | |
| 1487099 | 1487099 | PRJNA1104180_P_NODE_25522_length_242_cov_1.455621_g25379_i0 | PRJNA1104180 | 25522 | 242 | 1.455621 | 3.52260282 | Planctomycetes bacterium MalM25 | 2527998 | Bacteria | Bacteria | 148 | 2.6999999999999997e-31 | NTclustered | gi|1712524857|gb|CP036424.1| | 2527998 | g25379 | i0 | 85.034 | 60.896694214876 | 147 | 20 | 60 | 2 | 2 | 147 | 4653267 | 4653412 | Planctomycetes bacterium MalM25 chromosome | blastn | 14737 | 148 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetes bacterium MalM25 | |||||
| 1487161 | 1487161 | PRJNA1104180_P_NODE_4902_length_417_cov_2.523256_g4760_i0 | PRJNA1104180 | 4902 | 417 | 2.523256 | 10.52197752 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 704 | 0 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g4760 | i0 | 97.129 | 399.817745803357 | 418 | 11 | 100 | 1 | 1 | 417 | 2018303 | 2018720 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 166724 | 704 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 4038991 | 4038991 | PRJNA1104180_P_NODE_12044_length_296_cov_4.035874_g11902_i0 | PRJNA1104180 | 12044 | 296 | 4.035874 | 11.94618704 | Caulifigura coniformis | 2527983 | Bacteria | Bacteria | 520 | 6.2699999999999985e-143 | NTclustered | gi|1712508784|gb|CP036271.1| | 2527983 | g11902 | i0 | 98.316 | 79.9898648648649 | 297 | 4 | 100 | 1 | 1 | 296 | 2925303 | 2925007 | Caulifigura coniformis strain Pan44 chromosome | blastn | 23677 | 520 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Caulifigura | Caulifigura coniformis | |
| 8673499 | 8673499 | PRJNA1104180_P_NODE_2047_length_607_cov_1.986891_g1906_i0 | PRJNA1104180 | 2047 | 607 | 1.986891 | 12.06042837 | Candidatus Xiphinematobacter | 134550 | Bacteria | Bacteria | 664 | 0 | NTclustered | gi|939198278|gb|CP012665.1| | 1704307 | g1906 | i0 | 89.827 | 134.505766062603 | 521 | 48 | 85 | 5 | 90 | 607 | 15161 | 15679 | Candidatus Xiphinematobacter sp. Idaho Grape, complete genome | blastn | 81645 | 665 | 0.998496240601504 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Candidatus Xiphinematobacter | Candidatus Xiphinematobacter sp. Idaho Grape | |||
| 9139903 | 9139903 | PRJNA1104180_P_NODE_17988_length_261_cov_1.648936_g17846_i0 | PRJNA1104180 | 17988 | 261 | 1.648936 | 4.30372296 | planctomycete str. 658 | 149590 | Bacteria | Bacteria | 189 | 1.7399999999999999e-43 | NTclustered | gi|12583971|gb|AF245375.1|AF245375 | 149590 | g17846 | i0 | 90.278 | 12.3984674329502 | 144 | 14 | 55 | 0 | 1 | 144 | 1275 | 1418 | Planctomycete str. 658 23S ribosomal RNA gene, partial sequence | blastn | 3236 | 189 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | planctomycete str. 658 | ||
| 9139977 | 9139977 | PRJNA1104180_P_NODE_22788_length_247_cov_0.885057_g22645_i0 | PRJNA1104180 | 22788 | 247 | 0.885057 | 2.18609079 | Humisphaera borealis | 2807512 | Bacteria | Bacteria | 379 | 9.02e-101 | NTclustered | gi|1927742986|gb|CP063458.1| | 2807512 | g22645 | i0 | 95.021 | 5.51012145748988 | 241 | 12 | 99 | 0 | 2 | 242 | 5063481 | 5063721 | Humisphaera borealis strain M1803 chromosome, complete genome | blastn | 1361 | 379 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Humisphaera | Humisphaera borealis | |
| 9948478 | 9948478 | PRJNA1104180_P_NODE_2308_length_576_cov_4.892644_g2167_i0 | PRJNA1104180 | 2308 | 576 | 4.892644 | 28.18162944 | Planctomycetaceae | 126 | Bacteria | Bacteria | 472 | 3.68e-128 | NTclustered | gi|1712468061|gb|CP036265.1| | 2527989 | g2167 | i0 | 82.021 | 126.210069444444 | 584 | 78 | 100 | 24 | 1 | 576 | 373380 | 373944 | Alienimonas californiensis strain CA12 chromosome | blastn | 72697 | 473 | 0.997885835095137 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Alienimonas | Alienimonas californiensis | |
| 10415624 | 10415624 | PRJNA1104180_P_NODE_1049_length_848_cov_2.581935_g916_i0 | PRJNA1104180 | 1049 | 848 | 2.581935 | 21.8948088 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 758 | 0 | NTclustered | gi|2874253757|emb|OY969698.1| | 100233 | g916 | i0 | 87.24 | 109.390330188679 | 674 | 74 | 98 | 10 | 179 | 848 | 4422192 | 4421527 | MAG: uncultured Planctomycetaceae bacterium isolate MFD00082.bin.2.56 genome assembly, chromosome: 1 | blastn | 92763 | 758 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 11691074 | 11691074 | PRJNA1104180_P_NODE_23130_length_246_cov_0.890173_g22987_i0 | PRJNA1104180 | 23130 | 246 | 0.890173 | 2.18982558 | Aquisphaera giovannonii | 406548 | Bacteria | Bacteria | 394 | 3.2e-105 | NTclustered | gi|1730068067|gb|CP042997.1| | 406548 | g22987 | i0 | 95.528 | 74.0121951219512 | 246 | 11 | 100 | 0 | 1 | 246 | 5179264 | 5179019 | Aquisphaera giovannonii strain OJF2 chromosome, complete genome | blastn | 18207 | 394 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Aquisphaera | Aquisphaera giovannonii | |
| 11691158 | 11691158 | PRJNA1104180_P_NODE_3150_length_501_cov_4.046729_g3009_i0 | PRJNA1104180 | 3150 | 501 | 4.046729 | 20.27411229 | Stratiformator vulcanicus | 2527980 | Bacteria | Bacteria | 634 | 3.8199999999999996e-177 | NTclustered | gi|1712491480|gb|CP036268.1| | 2527980 | g3009 | i0 | 91.064 | 130.500998003992 | 470 | 41 | 94 | 1 | 32 | 501 | 3082732 | 3082264 | Stratiformator vulcanicus strain Pan189 chromosome | blastn | 65381 | 634 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Stratiformator | Stratiformator vulcanicus | |
| 12966314 | 12966314 | PRJNA1104180_P_NODE_4311_length_441_cov_3.331522_g4169_i0 | PRJNA1104180 | 4311 | 441 | 3.331522 | 14.69201202 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 706 | 0 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g4169 | i0 | 95.485 | 136.473922902494 | 443 | 18 | 100 | 1 | 1 | 441 | 2018784 | 2019226 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 60185 | 706 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 14241192 | 14241192 | PRJNA1104180_P_NODE_23192_length_246_cov_0.890173_g23049_i0 | PRJNA1104180 | 23192 | 246 | 0.890173 | 2.18982558 | Lacipirellula parvula | 2650471 | Bacteria | Bacteria | 357 | 4.1999999999999997e-94 | NTclustered | gi|1761017769|dbj|AP021861.1| | 2650471 | g23049 | i0 | 93.061 | 109.723577235772 | 245 | 16 | 99 | 1 | 1 | 245 | 5161323 | 5161566 | Lacipirellula parvula PX69 DNA, complete genome | blastn | 26992 | 357 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Lacipirellulaceae | Lacipirellula | Lacipirellula parvula | |
| 15514877 | 15514877 | PRJNA1104180_P_NODE_14013_length_283_cov_1.466667_g13871_i0 | PRJNA1104180 | 14013 | 283 | 1.466667 | 4.15066761 | Singulisphaera acidiphila | 466153 | Bacteria | Bacteria | 281 | 3.06e-71 | NTclustered | gi|430012750|gb|CP003364.1| | 886293 | g13871 | i0 | 85.56 | 43.2932862190813 | 277 | 31 | 96 | 8 | 8 | 278 | 8381442 | 8381715 | Singulisphaera acidiphila DSM 18658, complete genome | blastn | 12252 | 281 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Singulisphaera | Singulisphaera acidiphila | |
| 16789556 | 16789556 | PRJNA1104180_P_NODE_254_length_1530_cov_5.492107_g212_i0 | PRJNA1104180 | 254 | 1530 | 5.492107 | 84.0292371 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 1954 | 0 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g212 | i0 | 89.754 | 168.875163398693 | 1542 | 139 | 100 | 18 | 1 | 1530 | 2001641 | 2003175 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 258379 | 1954 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 18064202 | 18064202 | PRJNA1104180_P_NODE_8155_length_342_cov_2.148699_g8013_i0 | PRJNA1104180 | 8155 | 342 | 2.148699 | 7.34855058 | Anatilimnocola aggregata | 2528021 | Bacteria | Bacteria | 438 | 2.1199999999999993e-118 | NTclustered | gi|1712591889|gb|CP036274.1| | 2528021 | g8013 | i0 | 91.277 | 132.175438596491 | 321 | 28 | 94 | 0 | 19 | 339 | 7629029 | 7628709 | Anatilimnocola aggregata strain ETA_A8 chromosome, complete genome | blastn | 45204 | 438 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Anatilimnocola | Anatilimnocola aggregata | |
| 18064206 | 18064206 | PRJNA1104180_P_NODE_8515_length_337_cov_1.166667_g8373_i0 | PRJNA1104180 | 8515 | 337 | 1.166667 | 3.93166779 | Isosphaeraceae bacterium EP7 | 3139350 | Bacteria | Bacteria | 388 | 2.13e-103 | NTclustered | gi|2719878338|gb|CP151667.1| | 3139350 | g8373 | i0 | 87.611 | 113.362017804154 | 339 | 36 | 99 | 6 | 3 | 337 | 1599567 | 1599231 | Isosphaeraceae bacterium EP7 chromosome, complete genome | blastn | 38203 | 388 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaeraceae bacterium EP7 | ||
| 20613613 | 20613613 | PRJNA1104180_P_NODE_28237_length_213_cov_5.142857_g28094_i0 | PRJNA1104180 | 28237 | 213 | 5.142857 | 10.95428541 | Tepidisphaeraceae bacterium | 2876886 | Bacteria | Bacteria | 248 | 2.23e-61 | NTclustered | gi|2874253799|emb|OY969783.1| | 2876886 | g28094 | i0 | 87.85 | 6.75117370892019 | 214 | 22 | 99 | 4 | 1 | 212 | 2502856 | 2503067 | MAG: Tepidisphaeraceae bacterium isolate MFD04580.bin.c.1 genome assembly, chromosome: 1 | blastn | 1438 | 248 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Tepidisphaeraceae bacterium | ||
| 21422322 | 21422322 | PRJNA1104180_P_NODE_2517_length_555_cov_2.417012_g2376_i0 | PRJNA1104180 | 2517 | 555 | 2.417012 | 13.4144166 | Planctomycetaceae | 126 | Bacteria | Bacteria | 473 | 9.84e-129 | NTclustered | gi|1712491480|gb|CP036268.1| | 2527980 | g2376 | i0 | 84.139 | 75.5585585585586 | 517 | 52 | 93 | 12 | 2 | 517 | 3082268 | 3081781 | Stratiformator vulcanicus strain Pan189 chromosome | blastn | 41935 | 475 | 0.995789473684211 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Stratiformator | Stratiformator vulcanicus | |
| 21889054 | 21889054 | PRJNA1104180_P_NODE_14998_length_277_cov_1.995098_g14856_i0 | PRJNA1104180 | 14998 | 277 | 1.995098 | 5.52642146 | Isosphaeraceae bacterium EP7 | 3139350 | Bacteria | Bacteria | 409 | 1.31e-109 | NTclustered | gi|2719878338|gb|CP151667.1| | 3139350 | g14856 | i0 | 93.478 | 351.830324909747 | 276 | 17 | 99 | 1 | 2 | 277 | 1600411 | 1600137 | Isosphaeraceae bacterium EP7 chromosome, complete genome | blastn | 97457 | 409 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaeraceae bacterium EP7 | ||
| 24438383 | 24438383 | PRJNA1104180_P_NODE_3840_length_463_cov_4.564103_g3698_i0 | PRJNA1104180 | 3840 | 463 | 4.564103 | 21.13179689 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 776 | 0 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g3698 | i0 | 96.983 | 222.123110151188 | 464 | 10 | 99 | 4 | 1 | 462 | 4212081 | 4212542 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 102843 | 776 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;