RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1104180" and tax_clade = "Haptista"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Haptista · 2 ✖

bioproject 1

  • PRJNA1104180 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10415895 10415895 PRJNA1104180_P_NODE_28529_length_205_cov_7.265152_g28386_i0 PRJNA1104180 28529 205 7.265152 14.8935616 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 327 2.66e-85   NTclustered gi|551569863|ref|XM_005770835.1| 280463 g28386 i0 95.588 12.1658536585366 204 9 99 0 1 204 912 709 Emiliania huxleyi CCMP1516 hypothetical protein mRNA blastn 2494 327 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
21889220 21889220 PRJNA1104180_P_NODE_26058_length_241_cov_1.976190_g25915_i0 PRJNA1104180 26058 241 1.97619 4.7626179 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 394 3.13e-105   NTclustered gi|551614683|ref|XM_005788194.1| 280463 g25915 i0 96.25 35.9004149377593 240 9 99 0 2 241 90 329 Emiliania huxleyi CCMP1516 hypothetical protein mRNA blastn 8652 394 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;