RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1103784" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1103784 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5315012 5315012 PRJNA1103784_P_NODE_4405_length_274_cov_1.383085_g4350_i0 PRJNA1103784 4405 274 1.383085 3.7896529 Lichtheimia ornata 688661 Fungi Fungi 119 2.45e-22   NTclustered gi|2553554275|ref|XM_058481583.1| 688661 g4350 i0 88.66 6.09124087591241 97 11 35 0 1 97 184 88 Lichtheimia ornata RING-box protein 1A (O0I10_001488), partial mRNA blastn 1669 119 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata
16322662 16322662 PRJNA1103784_P_NODE_1513_length_415_cov_2.760234_g1458_i0 PRJNA1103784 1513 415 2.760234 11.4549711 Mucorales 4827 Fungi Fungi 206 2.89e-48   NTclustered gi|2432561090|ref|XM_053083126.1| 64632 g1458 i0 81.008 41.5542168674699 258 49 62 0 131 388 208 465 Mycotypha africana 40S ribosomal protein S23 (BDF20DRAFT_905178), partial mRNA blastn 17245 206 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;