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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1103784" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1103784 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7864816 7864816 PRJNA1103784_P_NODE_2407_length_345_cov_2.349265_g2352_i0 PRJNA1103784 2407 345 2.349265 8.10496425 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 571 2.0299999999999996e-158   NTclustered gi|1958075319|gb|CP064995.1| 2026720 g2352 i0 96.522 371.704347826087 345 12 100 0 1 345 694514 694170 Candidatus Saccharibacteria bacterium isolate Hjor_18-Q3-R7-51_MAXAC.102_uni chromosome, complete genome blastn 128238 571 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
8673413 8673413 PRJNA1103784_P_NODE_5887_length_250_cov_0.870056_g5832_i0 PRJNA1103784 5887 250 0.870056 2.17514 Bacteria 2 Bacteria Bacteria 178 3.58e-40   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g5832 i0 80.335 11.784 239 43 95 4 13 249 622105 622341 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 2946 178 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
23164454 23164454 PRJNA1103784_P_NODE_3979_length_283_cov_1.214286_g3924_i0 PRJNA1103784 3979 283 1.214286 3.43642938 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 171 6.909999999999999e-38   NTclustered gi|837350690|gb|CP011211.1| 1619070 g3924 i0 82.412 0.703180212014134 199 32 70 3 15 212 953584 953780 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 199 171 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;