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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA1102048" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1102048 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
211795 211795 PRJNA1102048_P_NODE_3001_length_486_cov_1.307506_g2897_i0 PRJNA1102048 3001 486 1.307506 6.35447916 Mercenaria mercenaria 6596 Mollusca Mollusca 311 7.08e-80   NTclustered gi|2442058763|ref|XM_045347307.2| 6596 g2897 i0 79.677 81.2325102880658 433 86 89 2 54 485 199 630 PREDICTED: Mercenaria mercenaria uncharacterized LOC123556531 (LOC123556531), mRNA blastn 39479 311 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
4038503 4038503 PRJNA1102048_P_NODE_324_length_1117_cov_3.643678_g267_i0 PRJNA1102048 324 1117 3.643678 40.69988326 Bradybaena similaris 145626 Mollusca Mollusca 58.4 0.002   NTclustered gi|2912995509|dbj|AP039600.1| 145626 g267 i0 100 0.0277529095792301 31 0 3 0 738 768 64398476 64398506 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 19, sequence blastn 31 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
7864485 7864485 PRJNA1102048_P_NODE_5787_length_358_cov_1.621053_g5683_i0 PRJNA1102048 5787 358 1.621053 5.80336974 Ylistrum balloti 509963 Mollusca Mollusca 231 4.06e-56   NTclustered gi|2592054340|ref|XM_060230341.1| 509963 g5683 i0 79.279 52.4888268156425 333 67 93 2 23 354 993 662 PREDICTED: Ylistrum balloti isocitrate dehydrogenase [NADP] cytoplasmic-like (LOC132565648), mRNA blastn 18791 231 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Ylistrum Ylistrum balloti
9139400 9139400 PRJNA1102048_P_NODE_7128_length_324_cov_1.725100_g7024_i0 PRJNA1102048 7128 324 1.7251 5.589324 Bradybaena similaris 145626 Mollusca Mollusca 60.2 1.82e-4   NTclustered gi|2913001038|dbj|AP039608.1| 145626 g7024 i0 100 1.93827160493827 32 0 10 0 241 272 52032470 52032439 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 27, sequence blastn 628 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
10415047 10415047 PRJNA1102048_P_NODE_10189_length_276_cov_1.517241_g10085_i0 PRJNA1102048 10189 276 1.517241 4.18758516 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.025   NTclustered gi|2912984370|dbj|AP039589.1| 145626 g10085 i0 100 0.101449275362319 28 0 10 0 116 143 35510050 35510077 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 8, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
21888571 21888571 PRJNA1102048_P_NODE_18158_length_229_cov_2.352564_g18054_i0 PRJNA1102048 18158 229 2.352564 5.38737156 Bradybaena similaris 145626 Mollusca Mollusca 60.2 1.22e-4   NTclustered gi|2912981848|dbj|AP039587.1| 145626 g18054 i0 100 0.877729257641921 32 0 14 0 19 50 16612045 16612076 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 6, sequence blastn 201 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
24437689 24437689 PRJNA1102048_P_NODE_8480_length_298_cov_1.368889_g8376_i0 PRJNA1102048 8480 298 1.368889 4.07928922 Mytilus trossulus 6551 Mollusca Mollusca 200 9.35e-47   NTclustered gi|2694137160|ref|XM_063544444.1| 6551 g8376 i0 81.028 16.6946308724832 253 46 85 2 10 261 953 1204 PREDICTED: Mytilus trossulus ruvB-like 2 (LOC134685059), transcript variant X1, mRNA blastn 4975 200 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus trossulus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;