RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJNA1102048" and tax_phylum = "Heterolobosea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 22 ✖

tax_clade 1

bioproject 1

  • PRJNA1102048 · 22 ✖

analysis 1

  • blastn · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
211741 211741 PRJNA1102048_P_NODE_13321_length_250_cov_0.870056_g13217_i0 PRJNA1102048 13321 250 0.870056 2.17514 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 424 4.16e-114   NTclustered gi|290971770|ref|XM_002668606.1| 5762 g13217 i0 97.2 3.82 250 7 100 0 1 250 513 264 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_60075), partial mRNA blastn 955 424 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
4038511 4038511 PRJNA1102048_P_NODE_4284_length_412_cov_1.672566_g4180_i0 PRJNA1102048 4284 412 1.672566 6.89097192 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 612 1.4499999999999997e-170   NTclustered gi|290987530|ref|XM_002676430.1| 5762 g4180 i0 93.643 31.2912621359223 409 26 99 0 1 409 410 2 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55800), mRNA blastn 12892 612 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
5314575 5314575 PRJNA1102048_P_NODE_14505_length_247_cov_1.350575_g14401_i0 PRJNA1102048 14505 247 1.350575 3.33592025 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 226 1.2399999999999997e-54   NTclustered gi|290983613|ref|XM_002674477.1| 5762 g14401 i0 83.468 1.00404858299595 248 36 100 5 1 247 230 473 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_50833), partial mRNA blastn 248 226 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
7397783 7397783 PRJNA1102048_P_NODE_11586_length_261_cov_1.537234_g11482_i0 PRJNA1102048 11586 261 1.537234 4.01218074 Naegleria 5761 Heterolobosea other_Eukaryota 472 1.54e-128   NTclustered gi|2618963742|gb|OR769034.1| 5762 g11482 i0 99.234 62.3371647509579 261 2 100 0 1 261 3803 3543 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 16270 472 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
7864500 7864500 PRJNA1102048_P_NODE_7267_length_321_cov_2.209677_g7163_i0 PRJNA1102048 7267 321 2.209677 7.09306317 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 558 1.46e-154   NTclustered gi|290971318|ref|XM_002668414.1| 5762 g7163 i0 98.125 99.1588785046729 320 6 99 0 2 321 686 367 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_61055), partial mRNA blastn 31830 558 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
9139416 9139416 PRJNA1102048_P_NODE_9128_length_288_cov_1.962791_g9024_i0 PRJNA1102048 9128 288 1.962791 5.65283808 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 198 3.2299999999999993e-46   NTclustered gi|2031939198|emb|OD957504.1| 5763 g9024 i0 80.859 22.7291666666667 256 45 88 4 2 255 1532 1785 Naegleria fowleri Karachi_NF001 strain blastn 6546 198 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
9139418 9139418 PRJNA1102048_P_NODE_9168_length_288_cov_1.297674_g9064_i0 PRJNA1102048 9168 288 1.297674 3.73730112 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 394 3.839999999999999e-105   NTclustered gi|290982150|ref|XM_002673748.1| 5762 g9064 i0 91.579 0.989583333333333 285 24 99 0 1 285 103 387 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_58883), mRNA blastn 285 394 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10415076 10415076 PRJNA1102048_P_NODE_13809_length_249_cov_0.875000_g13705_i0 PRJNA1102048 13809 249 0.875 2.17875 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 370 5.48e-98   NTclustered gi|290990354|ref|XM_002677756.1| 5762 g13705 i0 93.548 2.77911646586345 248 16 99 0 2 249 788 1035 Naegleria gruberi nuclear lim interactor-interacting protein (NAEGRDRAFT_79569), mRNA blastn 692 370 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10415098 10415098 PRJNA1102048_P_NODE_15989_length_244_cov_0.900585_g15885_i0 PRJNA1102048 15989 244 0.900585 2.1974274 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 279 9.27e-71   NTclustered gi|2108204944|ref|XM_002668544.2| 5762 g15885 i0 90.61 2.00409836065574 213 17 86 2 1 211 161 372 Naegleria gruberi rho family small GTPase (NAEGRDRAFT_82339), partial mRNA blastn 489 279 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11690395 11690395 PRJNA1102048_P_NODE_13430_length_250_cov_0.870056_g13326_i0 PRJNA1102048 13430 250 0.870056 2.17514 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 381 2.5399999999999996e-101   NTclustered gi|290979181|ref|XM_002672267.1| 5762 g13326 i0 96.137 6.22 233 9 93 0 1 233 257 25 Naegleria gruberi 40S ribosomal protein (NAEGRDRAFT_56310), mRNA blastn 1555 381 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11690431 11690431 PRJNA1102048_P_NODE_17210_length_242_cov_0.911243_g17106_i0 PRJNA1102048 17210 242 0.911243 2.20520806 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 263 9.250000000000001e-66   NTclustered gi|290971318|ref|XM_002668414.1| 5762 g17106 i0 86.809 39.4917355371901 235 31 97 0 8 242 334 568 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_61055), partial mRNA blastn 9557 263 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14240493 14240493 PRJNA1102048_P_NODE_17612_length_241_cov_0.916667_g17508_i0 PRJNA1102048 17612 241 0.916667 2.20916747 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 401 1.8699999999999993e-107   NTclustered gi|290991601|ref|XM_002678378.1| 5762 g17508 i0 96.68 3.96265560165975 241 8 100 0 1 241 417 177 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_36356), partial mRNA blastn 955 401 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
15514357 15514357 PRJNA1102048_P_NODE_15693_length_245_cov_0.895349_g15589_i0 PRJNA1102048 15693 245 0.895349 2.19360505 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 139 1.6499999999999999e-28   NTclustered gi|290975657|ref|XM_002670513.1| 5762 g15589 i0 91.919 1.02040816326531 99 8 40 0 1 99 99 1 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_60960), partial mRNA blastn 250 139 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18063501 18063501 PRJNA1102048_P_NODE_8315_length_301_cov_2.692982_g8211_i0 PRJNA1102048 8315 301 2.692982 8.10587582 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 496 1.08e-135   NTclustered gi|290988743|ref|XM_002677007.1| 5762 g8211 i0 96.346 2.00332225913621 301 11 100 0 1 301 307 7 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_36778), mRNA blastn 603 496 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
21888521 21888521 PRJNA1102048_P_NODE_13938_length_249_cov_0.875000_g13834_i0 PRJNA1102048 13938 249 0.875 2.17875 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 416 6.939999999999999e-112   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g13834 i0 96.8 14.8795180722892 250 7 100 1 1 249 3858 3609 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3705 416 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
21888532 21888532 PRJNA1102048_P_NODE_14578_length_247_cov_0.885057_g14474_i0 PRJNA1102048 14578 247 0.885057 2.18609079 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 407 4.14e-109   NTclustered gi|290983946|ref|XM_002674643.1| 5762 g14474 i0 96.356 1 247 9 100 0 1 247 271 25 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_80517), mRNA blastn 247 407 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23164021 23164021 PRJNA1102048_P_NODE_15699_length_245_cov_0.895349_g15595_i0 PRJNA1102048 15699 245 0.895349 2.19360505 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 185 2.09e-42   NTclustered gi|290977743|ref|XM_002671551.1| 5762 g15595 i0 86.747 5.85714285714286 166 22 68 0 3 168 854 689 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_59416), mRNA blastn 1435 185 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23164035 23164035 PRJNA1102048_P_NODE_16539_length_243_cov_0.905882_g16435_i0 PRJNA1102048 16539 243 0.905882 2.20129326 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 399 6.789999999999999e-107   NTclustered gi|290978289|ref|XM_002671823.1| 5762 g16435 i0 96.296 3.99588477366255 243 9 100 0 1 243 192 434 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_73044), partial mRNA blastn 971 399 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23972290 23972290 PRJNA1102048_P_NODE_2359_length_537_cov_1.394397_g2256_i0 PRJNA1102048 2359 537 1.394397 7.48791189 Naegleria 5761 Heterolobosea other_Eukaryota 965 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g2256 i0 99.069 32.6983240223464 537 5 100 0 1 537 4437 3901 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 17559 970 0.994845360824742 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24437580 24437580 PRJNA1102048_P_NODE_10840_length_269_cov_1.362245_g10736_i0 PRJNA1102048 10840 269 1.362245 3.66443905 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 420 5.86e-113   NTclustered gi|290997645|ref|XM_002681346.1| 5762 g10736 i0 95.113 1.97769516728625 266 13 99 0 4 269 430 165 Naegleria gruberi 40s ribosomal protein S3a (NAEGRDRAFT_57012), mRNA blastn 532 420 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24437615 24437615 PRJNA1102048_P_NODE_15160_length_246_cov_0.890173_g15056_i0 PRJNA1102048 15160 246 0.890173 2.18982558 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 405 1.48e-108   NTclustered gi|290978665|ref|XM_002672010.1| 5762 g15056 i0 96.341 3.98780487804878 246 9 100 0 1 246 348 103 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82759), mRNA blastn 981 405 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24437635 24437635 PRJNA1102048_P_NODE_17500_length_241_cov_0.982143_g17396_i0 PRJNA1102048 17500 241 0.982143 2.36696463 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 399 6.729999999999998e-107   NTclustered gi|290999756|ref|XM_002682400.1| 5762 g17396 i0 96.667 59.7302904564315 240 8 99 0 2 241 252 13 Naegleria gruberi histone H3 (NAEGRDRAFT_35000), mRNA blastn 14395 399 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;