RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA1102048" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA1102048 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1486476 1486476 PRJNA1102048_P_NODE_9382_length_285_cov_2.169811_g9278_i0 PRJNA1102048 9382 285 2.169811 6.18396135 Neobodo designis 312471 Euglenozoa other_Eukaryota 525 1.2899999999999994e-144   NTclustered gi|1476664123|gb|MH917128.1| 312471 g9278 i0 100 98.4456140350877 284 0 99 0 2 285 605 322 Neobodo designis isolate M1-19 small subunit ribosomal RNA gene, partial sequence blastn 28057 525 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
2762472 2762472 PRJNA1102048_P_NODE_5703_length_360_cov_2.452962_g5599_i0 PRJNA1102048 5703 360 2.452962 8.8306632 Neobodo designis 312471 Euglenozoa other_Eukaryota 649 0   NTclustered gi|1996609219|gb|MW694338.1| 312471 g5599 i0 99.167 89.5 360 3 100 0 1 360 533 892 Neobodo designis isolate G409 small subunit ribosomal RNA gene, partial sequence blastn 32220 649 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
5314597 5314597 PRJNA1102048_P_NODE_16785_length_243_cov_0.905882_g16681_i0 PRJNA1102048 16785 243 0.905882 2.20129326 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 254 5.59e-63   NTclustered gi|1002436984|ref|XM_015807561.1| 157538 g16681 i0 85.597 91.3374485596708 243 33 99 2 1 242 404 163 Leptomonas pyrrhocoris putative 40S ribosomal protein S11 mRNA blastn 22195 254 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
7864395 7864395 PRJNA1102048_P_NODE_13087_length_250_cov_1.361582_g12983_i0 PRJNA1102048 13087 250 1.361582 3.403955 Strigomonas culicis 28005 Euglenozoa other_Eukaryota 274 4.44e-69   NTclustered gi|529494591|gb|KC140165.1| 28005 g12983 i0 86.719 101.556 256 22 100 11 1 250 837 588 Strigomonas culicis clone BCU_3.3.1.1 adenosylhomocysteinase gene, complete cds blastn 25389 274 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Strigomonas Strigomonas culicis
7864424 7864424 PRJNA1102048_P_NODE_15507_length_245_cov_1.209302_g15403_i0 PRJNA1102048 15507 245 1.209302 2.9627899 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 121 5.98e-23   NTclustered gi|1002447590|ref|XM_015802834.1| 157538 g15403 i0 82.734 11.4612244897959 139 20 56 4 2 138 321 185 Leptomonas pyrrhocoris putative ubiquitin/ribosomal protein S27a mRNA blastn 2808 121 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
8673230 8673230 PRJNA1102048_P_NODE_14107_length_248_cov_0.880000_g14003_i0 PRJNA1102048 14107 248 0.88 2.1824 Leishmania 5658 Euglenozoa other_Eukaryota 230 9.65e-56   NTclustered gi|2785807994|ref|XM_067203157.1| 2249476 g14003 i0 86.603 27.3185483870968 209 26 84 2 2 209 208 1 Leishmania orientalis uncharacterized protein (LSCM4_01092), partial mRNA blastn 6775 230 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania orientalis
10415100 10415100 PRJNA1102048_P_NODE_16069_length_244_cov_0.900585_g15965_i0 PRJNA1102048 16069 244 0.900585 2.1974274 Leishmania mexicana 5665 Euglenozoa other_Eukaryota 250 7.27e-62   NTclustered gi|401426024|ref|XM_003877448.1| 929439 g15965 i0 88.462 22.405737704918 208 22 85 2 29 235 1 207 Leishmania mexicana MHOM/GT/2001/U1103 S-adenosylmethionine synthetase partial mRNA blastn 5467 250 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania mexicana
11223442 11223442 PRJNA1102048_P_NODE_3709_length_443_cov_1.662162_g3605_i0 PRJNA1102048 3709 443 1.662162 7.36337766 Leishmania 5658 Euglenozoa other_Eukaryota 198 5.1999999999999996e-46   NTclustered gi|2794986241|ref|XM_067853970.1| 2802991 g3605 i0 76.355 30.7923250564334 406 74 89 19 27 421 395 1 Leishmania sp. Namibia uncharacterized protein (JIQ42_05862), partial mRNA blastn 13641 198 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania sp. Namibia
15514346 15514346 PRJNA1102048_P_NODE_15133_length_246_cov_0.890173_g15029_i0 PRJNA1102048 15133 246 0.890173 2.18982558 Porcisia hertigi 2761500 Euglenozoa other_Eukaryota 300 7.19e-77   NTclustered gi|2794844561|ref|XM_067898707.1| 2761500 g15029 i0 90.667 39.7682926829268 225 21 91 0 3 227 225 1 Porcisia hertigi uncharacterized protein (JKF63_02683), partial mRNA blastn 9783 300 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Porcisia Porcisia hertigi
19337516 19337516 PRJNA1102048_P_NODE_14936_length_246_cov_1.884393_g14832_i0 PRJNA1102048 14936 246 1.884393 4.63560678 Trypanosoma congolense 5692 Euglenozoa other_Eukaryota 207 4.48e-49   NTclustered gi|342183762|emb|HE575323.1| 1068625 g14832 i0 84.762 3.47967479674797 210 29 85 2 13 222 732862 732656 Trypanosoma congolense IL3000 annotated genomic contig, chromosome 10 blastn 856 207 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma congolense
20146376 20146376 PRJNA1102048_P_NODE_18136_length_230_cov_2.509554_g18032_i0 PRJNA1102048 18136 230 2.509554 5.7719742 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 209 1.15e-49   NTclustered gi|84105380|gb|DQ295211.1| 127150 g18032 i0 83.784 42.5565217391304 222 34 96 2 10 230 438 218 Rhynchomonas nasuta alpha tubulin 1 gene, partial cds blastn 9788 211 0.990521327014218 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta
23972296 23972296 PRJNA1102048_P_NODE_5379_length_371_cov_1.214765_g5275_i0 PRJNA1102048 5379 371 1.214765 4.50677815 Trypanosoma 5690 Euglenozoa other_Eukaryota 263 1.5e-65   NTclustered gi|686648000|ref|XM_009318170.1| 71804 g5275 i0 82.581 162.576819407008 310 43 82 7 35 340 1 303 Trypanosoma grayi histone H4 partial mRNA blastn 60316 263 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;