RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1102048" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1102048 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5314592 5314592 PRJNA1102048_P_NODE_16105_length_244_cov_0.900585_g16001_i0 PRJNA1102048 16105 244 0.900585 2.1974274 Anemonia sulcata 6108 Cnidaria other_Eukaryota 67.6 7.86e-7   NTclustered gi|2917940759|emb|OZ237572.1| 6108 g16001 i0 97.436 1.35655737704918 39 1 16 0 35 73 6680239 6680201 Anemonia sulcata genome assembly, chromosome: 18 blastn 331 67.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
6589813 6589813 PRJNA1102048_P_NODE_16886_length_242_cov_2.136095_g16782_i0 PRJNA1102048 16886 242 2.136095 5.1693499 Stephanocoenia intersepta 504342 Cnidaria other_Eukaryota 130 9.79e-26   NTclustered gi|2890133044|emb|OZ219147.1| 504342 g16782 i0 79.104 30.004132231405 201 32 81 6 6 201 15505 15310 Stephanocoenia intersepta genome assembly, organelle: mitochondrion blastn 7261 130 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Astrocoeniidae Stephanocoenia Stephanocoenia intersepta
7864527 7864527 PRJNA1102048_P_NODE_9947_length_279_cov_1.422330_g9843_i0 PRJNA1102048 9947 279 1.42233 3.9683007 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 52.8 0.026   NTclustered gi|2729103665|ref|XM_065214917.1| 499914 g9843 i0 100 0.100358422939068 28 0 10 0 107 134 433 406 PREDICTED: Rhopilema esculentum ELMO domain-containing protein 3-like (LOC135695739), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
15514402 15514402 PRJNA1102048_P_NODE_3733_length_442_cov_1.216802_g3629_i0 PRJNA1102048 3733 442 1.216802 5.37826484 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 311 6.39e-80   NTclustered gi|2519013169|ref|XM_057457998.1| 13093 g3629 i0 80.336 107.714932126697 417 76 94 6 3 416 714 301 PREDICTED: Hydractinia symbiolongicarpus polyubiquitin-C (LOC130655264), mRNA blastn 47610 311 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;