RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1102048" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1102048 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7864456 7864456 PRJNA1102048_P_NODE_2567_length_518_cov_1.977528_g2463_i0 PRJNA1102048 2567 518 1.977528 10.24359504 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 67.6 1.81e-6   NTclustered gi|1844516988|ref|XM_719929.3| 5861 g2463 i0 100 0.125482625482625 36 0 7 0 213 248 1767 1732 Plasmodium yoelii uncharacterized protein (PY17X_1224000), partial mRNA blastn 65 67.6 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
21888642 21888642 PRJNA1102048_P_NODE_9738_length_281_cov_1.985577_g9634_i0 PRJNA1102048 9738 281 1.985577 5.57947137 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 241 5.15e-59   NTclustered gi|1673111941|ref|XM_029359194.1| 94643 g9634 i0 82.206 20.9679715302491 281 48 99 2 2 281 18 297 Besnoitia besnoiti putative calmodulin (BESB_004390), partial mRNA blastn 5892 241 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
25246345 25246345 PRJNA1102048_P_NODE_13720_length_249_cov_0.875000_g13616_i0 PRJNA1102048 13720 249 0.875 2.17875 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.023   NTclustered gi|915136483|ref|XM_013481102.1| 5804 g13616 i0 100 0.240963855421687 28 0 11 0 175 202 127 154 Eimeria maxima hypothetical protein, conserved partial mRNA blastn 60 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;