RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1102048" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJNA1102048 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14240540 14240540 PRJNA1102048_P_NODE_7852_length_310_cov_1.632911_g7748_i0 PRJNA1102048 7852 310 1.632911 5.0620241 Hokovirus HKV1 1977638 Viruses Viruses 261 4.42e-65   NTclustered gi|1174571674|gb|KY684104.1| 1977638 g7748 i0 83.333 57.8387096774194 282 47 91 0 1 282 163173 163454 Hokovirus HKV1 isolate HKV1 clone Hokovirus_2, sequence blastn 17930 261 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Hokovirus Hokovirus HKV1
20146383 20146383 PRJNA1102048_P_NODE_4496_length_402_cov_3.294833_g4392_i0 PRJNA1102048 4496 402 3.294833 13.24522866 Prasinovirus 181084 Viruses Viruses 87.9 1.06e-12   NTclustered gi|2853279488|gb|PQ442268.1| 3378364 g4392 i0 100 2.25373134328358 47 0 12 0 314 360 128794 128840 Ostreococcus tauri virus 09-565, partial genome blastn 906 87.9 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Prasinovirus Ostreococcus tauri virus 09-565

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;