RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1101048" and tax_phylum = "Bryozoa"

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tax_superkingdom 1

tax_phylum 1

  • Bryozoa · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1101048 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13773208 13773208 PRJNA1101048_P_NODE_6691_length_256_cov_10.546448_g6635_i0 PRJNA1101048 6691 256 10.546448 26.99890688 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 366 7.3199999999999995e-97   NTclustered gi|359292491|gb|JN680929.1| 56620 g6635 i0 99.502 78.83203125 201 1 79 0 1 201 887 687 Plumatella emarginata 18S ribosomal RNA gene, partial sequence blastn 20181 366 1 Eukaryota Opisthokonta Metazoa Bryozoa Phylactolaemata   Plumatellidae Plumatella Plumatella emarginata
19337019 19337019 PRJNA1101048_P_NODE_756_length_596_cov_2.319312_g703_i0 PRJNA1101048 756 596 2.319312 13.82309952 Plumatella vaihiriae 480603 Bryozoa other_Eukaryota 789 0   NTclustered gi|159031911|dbj|AB365625.1| 480603 g703 i0 99.312 54.6610738255034 436 3 73 0 135 570 518 83 Plumatella vaihiriae mitochondrial gene for 16S ribosomal RNA, partial sequence blastn 32578 789 1 Eukaryota Opisthokonta Metazoa Bryozoa Phylactolaemata   Plumatellidae Plumatella Plumatella vaihiriae
23163540 23163540 PRJNA1101048_P_NODE_3559_length_326_cov_1.806324_g3503_i0 PRJNA1101048 3559 326 1.806324 5.88861624 Plumatella vaihiriae 480603 Bryozoa other_Eukaryota 573 5.289999999999999e-159   NTclustered gi|359292693|gb|JN681060.1| 480603 g3503 i0 99.367 50.4969325153374 316 2 97 0 11 326 1024 709 Plumatella vaihiriae 12S ribosomal RNA (rrnS) gene, partial sequence; tRNA-Glu, tRNA-Trp, tRNA-Tyr, and tRNA-Arg genes, complete sequence; and 16S ribosomal RNA (rrnL) gene, partial sequence; mitochondrial blastn 16462 573 1 Eukaryota Opisthokonta Metazoa Bryozoa Phylactolaemata   Plumatellidae Plumatella Plumatella vaihiriae
25246198 25246198 PRJNA1101048_P_NODE_8140_length_247_cov_4.097701_g8084_i0 PRJNA1101048 8140 247 4.097701 10.12132147 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 424 4.1099999999999996e-114   NTclustered gi|359292663|gb|JN681030.1| 56620 g8084 i0 99.571 93.1093117408907 233 0 94 1 8 239 2203 2435 Plumatella emarginata 28S ribosomal RNA gene, partial sequence blastn 22998 424 1 Eukaryota Opisthokonta Metazoa Bryozoa Phylactolaemata   Plumatellidae Plumatella Plumatella emarginata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;