RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1098727" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1098727 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
211114 211114 PRJNA1098727_P_NODE_3101_length_383_cov_1.077844_g2860_i0 PRJNA1098727 3101 383 1.077844 4.12814252 Ignavibacteria bacterium 2053306 Bacteria Bacteria 202 3.4299999999999996e-47   NTclustered gi|1858604176|gb|CP054675.1| 2053306 g2860 i0 76.546 146.650130548303 388 79 99 10 1 382 874028 874409 Ignavibacteria bacterium isolate Ch128a chromosome, complete genome blastn 56167 202 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
2761817 2761817 PRJNA1098727_P_NODE_6423_length_247_cov_1.555556_g6182_i0 PRJNA1098727 6423 247 1.555556 3.84222332 Ignavibacteria bacterium 2053306 Bacteria Bacteria 252 2.05e-62   NTclustered gi|1858604176|gb|CP054675.1| 2053306 g6182 i0 85.714 77.8056680161943 238 34 96 0 9 246 872925 872688 Ignavibacteria bacterium isolate Ch128a chromosome, complete genome blastn 19218 252 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
18062804 18062804 PRJNA1098727_P_NODE_7795_length_221_cov_1.558140_g7554_i0 PRJNA1098727 7795 221 1.55814 3.4434894 Ignavibacteria bacterium 2053306 Bacteria Bacteria 296 8.2e-76   NTclustered gi|1858604176|gb|CP054675.1| 2053306 g7554 i0 90.95 813.41628959276 221 18 99 1 2 220 873342 873562 Ignavibacteria bacterium isolate Ch128a chromosome, complete genome blastn 179765 296 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;