contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA1098727" and tax_phylum = "Chloroflexota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3570359 | 3570359 | PRJNA1098727_P_NODE_5103_length_285_cov_1.351695_g4862_i0 | PRJNA1098727 | 5103 | 285 | 1.351695 | 3.85233075 | Tepidiforma | 2682228 | Bacteria | Bacteria | 448 | 2.8699999999999997e-121 | NTclustered | gi|1756502384|gb|CP042829.1| | 2601677 | g4862 | i0 | 95.07 | 92.3473684210526 | 284 | 14 | 99 | 0 | 2 | 285 | 2204205 | 2204488 | Tepidiforma bonchosmolovskayae strain 3753O chromosome, complete genome | blastn | 26319 | 448 | 1 | Bacteria | Bacillati | Chloroflexota | Tepidiformia | Tepidiformales | Tepidiformaceae | Tepidiforma | Tepidiforma bonchosmolovskayae | ||
| 4037836 | 4037836 | PRJNA1098727_P_NODE_16224_length_157_cov_2.851852_g15983_i0 | PRJNA1098727 | 16224 | 157 | 2.851852 | 4.47740764 | Tepidiforma bonchosmolovskayae | 2601677 | Bacteria | Bacteria | 222 | 9.329999999999999e-54 | NTclustered | gi|1756502384|gb|CP042829.1| | 2601677 | g15983 | i0 | 92.357 | 410.369426751592 | 157 | 10 | 99 | 2 | 1 | 156 | 2202510 | 2202355 | Tepidiforma bonchosmolovskayae strain 3753O chromosome, complete genome | blastn | 64428 | 222 | 1 | Bacteria | Bacillati | Chloroflexota | Tepidiformia | Tepidiformales | Tepidiformaceae | Tepidiforma | Tepidiforma bonchosmolovskayae | ||
| 18871404 | 18871404 | PRJNA1098727_P_NODE_16055_length_160_cov_2.306306_g15814_i0 | PRJNA1098727 | 16055 | 160 | 2.306306 | 3.6900896 | Tepidiforma | 2682228 | Bacteria | Bacteria | 211 | 2.07e-50 | NTclustered | gi|1756502384|gb|CP042829.1| | 2601677 | g15814 | i0 | 90.625 | 86.025 | 160 | 13 | 99 | 2 | 1 | 159 | 2203881 | 2203723 | Tepidiforma bonchosmolovskayae strain 3753O chromosome, complete genome | blastn | 13764 | 211 | 1 | Bacteria | Bacillati | Chloroflexota | Tepidiformia | Tepidiformales | Tepidiformaceae | Tepidiforma | Tepidiforma bonchosmolovskayae | ||
| 20146216 | 20146216 | PRJNA1098727_P_NODE_6836_length_238_cov_2.671958_g6595_i0 | PRJNA1098727 | 6836 | 238 | 2.671958 | 6.35926004 | Tepidiforma | 2682228 | Bacteria | Bacteria | 353 | 5.23e-93 | NTclustered | gi|1756502384|gb|CP042829.1| | 2601677 | g6595 | i0 | 93.644 | 162.844537815126 | 236 | 15 | 99 | 0 | 2 | 237 | 2204692 | 2204927 | Tepidiforma bonchosmolovskayae strain 3753O chromosome, complete genome | blastn | 38757 | 353 | 1 | Bacteria | Bacillati | Chloroflexota | Tepidiformia | Tepidiformales | Tepidiformaceae | Tepidiforma | Tepidiforma bonchosmolovskayae | ||
| 24437011 | 24437011 | PRJNA1098727_P_NODE_7800_length_221_cov_1.488372_g7559_i0 | PRJNA1098727 | 7800 | 221 | 1.488372 | 3.28930212 | Roseiflexus sp. RS-1 | 357808 | Bacteria | Bacteria | 183 | 6.659999999999998e-42 | NTclustered | gi|470481958|ref|NR_076505.1| | 357808 | g7559 | i0 | 82.143 | 235.723981900452 | 224 | 30 | 99 | 9 | 1 | 218 | 518 | 737 | Roseiflexus sp. RS-1 strain RS-1 23S ribosomal RNA, complete sequence | blastn | 52095 | 183 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Chloroflexales | Roseiflexaceae | Roseiflexus | Roseiflexus sp. RS-1 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;