RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1098727" and tax_phylum = "Bacillariophyta"

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tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1098727 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5313977 5313977 PRJNA1098727_P_NODE_6425_length_247_cov_1.510101_g6184_i0 PRJNA1098727 6425 247 1.510101 3.72994947 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 444 3.15e-120   NTclustered gi|2589355395|ref|NC_077461.1| 29204 g6184 i0 99.187 199.072874493927 246 2 99 0 1 246 71465 71710 Cyclotella cryptica chloroplast, complete genome blastn 49171 444 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
7863811 7863811 PRJNA1098727_P_NODE_14287_length_165_cov_1.034483_g14046_i0 PRJNA1098727 14287 165 1.034483 1.70689695 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 292 7.47e-75   NTclustered gi|2589355395|ref|NC_077461.1| 29204 g14046 i0 98.78 146.678787878788 164 2 99 0 1 164 80209 80372 Cyclotella cryptica chloroplast, complete genome blastn 24202 292 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
23163427 23163427 PRJNA1098727_P_NODE_14559_length_165_cov_0.896552_g14318_i0 PRJNA1098727 14559 165 0.896552 1.4793108 Stephanocyclus meneghinianus 29205 SAR_Eukaryotes SAR_Eukaryotes 276 7.52e-70   NTclustered gi|2728412634|gb|OR666648.1| 29205 g14318 i0 96.951 82 164 5 99 0 2 165 35096 35259 Stephanocyclus meneghinianus chloroplast, complete genome blastn 13530 276 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Stephanocyclus Stephanocyclus meneghinianus
25246174 25246174 PRJNA1098727_P_NODE_6260_length_251_cov_1.009901_g6019_i0 PRJNA1098727 6260 251 1.009901 2.53485151 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 296 9.52e-76   NTclustered gi|2728412634|gb|OR666648.1| 29205 g6019 i0 89.407 176.713147410359 236 24 94 1 2 237 69845 69611 Stephanocyclus meneghinianus chloroplast, complete genome blastn 44355 296 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Stephanocyclus Stephanocyclus meneghinianus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;