contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA1098727" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 211124 | 211124 | PRJNA1098727_P_NODE_81_length_1912_cov_3.290929_g46_i0 | PRJNA1098727 | 81 | 1912 | 3.290929 | 62.92256248 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 2920 | 0 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g46 | i0 | 94.43 | 491.54550209205 | 1903 | 98 | 99 | 8 | 2 | 1900 | 51594 | 53492 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 939835 | 2920 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 4037826 | 4037826 | PRJNA1098727_P_NODE_14904_length_164_cov_0.904348_g14663_i0 | PRJNA1098727 | 14904 | 164 | 0.904348 | 1.48313072 | Leptotrichia sp. HMT-225 | 3058373 | Bacteria | Bacteria | 291 | 2.67e-74 | NTclustered | gi|2557559843|gb|CP130323.1| | 3058373 | g14663 | i0 | 98.773 | 7.90853658536585 | 163 | 2 | 99 | 0 | 1 | 163 | 127907 | 127745 | Leptotrichia sp. HMT-225 chromosome, complete genome | blastn | 1297 | 291 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. HMT-225 | ||
| 4847889 | 4847889 | PRJNA1098727_P_NODE_12844_length_169_cov_0.866667_g12603_i0 | PRJNA1098727 | 12844 | 169 | 0.866667 | 1.46466723 | Fusobacterium | 848 | Bacteria | Bacteria | 309 | 7.58e-80 | NTclustered | gi|2707733444|gb|CP077171.1| | 76859 | g12603 | i0 | 100 | 98.8165680473373 | 167 | 0 | 99 | 0 | 2 | 168 | 682810 | 682644 | Fusobacterium animalis strain SB043 chromosome, complete genome | blastn | 16700 | 309 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium animalis | ||
| 6122891 | 6122891 | PRJNA1098727_P_NODE_1165_length_654_cov_2.773554_g951_i0 | PRJNA1098727 | 1165 | 654 | 2.773554 | 18.13904316 | Leptotrichia | 32067 | Bacteria | Bacteria | 1116 | 0 | NTclustered | gi|470484715|ref|NR_076664.1| | 40542 | g951 | i0 | 97.833 | 460.241590214067 | 646 | 14 | 99 | 0 | 3 | 648 | 1269 | 1914 | Leptotrichia buccalis strain C-1013-b 23S ribosomal RNA gene, complete sequence | blastn | 300998 | 1127 | 0.990239574090506 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 12498643 | 12498643 | PRJNA1098727_P_NODE_4830_length_294_cov_1.118367_g4589_i0 | PRJNA1098727 | 4830 | 294 | 1.1183670000000001 | 3.28799898 | Fusobacterium | 848 | Bacteria | Bacteria | 532 | 7.989999999999998e-147 | NTclustered | gi|2706506546|gb|CP084156.1| | 76857 | g4589 | i0 | 99.32 | 402.21768707483 | 294 | 2 | 100 | 0 | 1 | 294 | 1588054 | 1587761 | Fusobacterium polymorphum strain KCOM2510 chromosome | blastn | 118252 | 532 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 23163442 | 23163442 | PRJNA1098727_P_NODE_2039_length_482_cov_2.956120_g1805_i0 | PRJNA1098727 | 2039 | 482 | 2.95612 | 14.2484984 | Leptotrichia sp. HMT-225 | 3058373 | Bacteria | Bacteria | 859 | 0 | NTclustered | gi|2557559843|gb|CP130323.1| | 3058373 | g1805 | i0 | 98.958 | 172.504149377593 | 480 | 5 | 99 | 0 | 2 | 481 | 197159 | 196680 | Leptotrichia sp. HMT-225 chromosome, complete genome | blastn | 83147 | 859 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. HMT-225 | ||
| 24437006 | 24437006 | PRJNA1098727_P_NODE_4480_length_307_cov_1.678295_g4239_i0 | PRJNA1098727 | 4480 | 307 | 1.678295 | 5.15236565 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 564 | 2.98e-156 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g4239 | i0 | 100 | 441.775244299674 | 305 | 0 | 99 | 0 | 1 | 305 | 53541 | 53845 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 135625 | 564 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 25246146 | 25246146 | PRJNA1098727_P_NODE_10580_length_186_cov_2.087591_g10339_i0 | PRJNA1098727 | 10580 | 186 | 2.087591 | 3.88291926 | Leptotrichia | 32067 | Bacteria | Bacteria | 339 | 1.0899999999999998e-88 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g10339 | i0 | 100 | 301.645161290323 | 183 | 0 | 98 | 0 | 2 | 184 | 2256484 | 2256302 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 56106 | 339 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 25246151 | 25246151 | PRJNA1098727_P_NODE_11740_length_176_cov_1.566929_g11499_i0 | PRJNA1098727 | 11740 | 176 | 1.566929 | 2.75779504 | Fusobacterium | 848 | Bacteria | Bacteria | 324 | 2.85e-84 | NTclustered | gi|2704983719|gb|CP077132.1| | 851 | g11499 | i0 | 100 | 493.977272727273 | 175 | 0 | 99 | 0 | 2 | 176 | 93146 | 92972 | Fusobacterium nucleatum strain KCOM3208 chromosome, complete genome | blastn | 86940 | 326 | 0.993865030674847 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 25246169 | 25246169 | PRJNA1098727_P_NODE_2740_length_411_cov_1.737569_g2500_i0 | PRJNA1098727 | 2740 | 411 | 1.737569 | 7.14140859 | Fusobacterium | 848 | Bacteria | Bacteria | 750 | 0 | NTclustered | gi|1370537877|gb|CP028108.1| | 860 | g2500 | i0 | 99.756 | 474.085158150852 | 409 | 1 | 99 | 0 | 2 | 410 | 462189 | 462597 | Fusobacterium periodonticum strain 2_1_31 chromosome, complete genome | blastn | 194849 | 756 | 0.992063492063492 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium periodonticum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;