RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA1098727" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 7 ✖

bioproject 1

  • PRJNA1098727 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2761811 2761811 PRJNA1098727_P_NODE_15863_length_162_cov_0.920354_g15622_i0 PRJNA1098727 15863 162 0.920354 1.49097348 Natronomonas halophila 2747817 Archaea Archaea 250 4.45e-62   NTclustered gi|1865516082|gb|CP058334.1| 2747817 g15622 i0 94.444 54.4506172839506 162 9 100 0 1 162 1000870 1000709 Natronomonas halophila strain C90 chromosome, complete genome blastn 8821 250 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas halophila
4037831 4037831 PRJNA1098727_P_NODE_15444_length_163_cov_0.894737_g15203_i0 PRJNA1098727 15444 163 0.894737 1.45842131 Halobaculum sp. CBA1158 2904243 Archaea Archaea 294 2.04e-75   NTclustered gi|2176096791|gb|CP090373.1| 2904243 g15203 i0 99.383 21.4846625766871 162 1 99 0 2 163 3587 3426 Halobaculum sp. CBA1158 plasmid pCBA1158-2, complete sequence blastn 3502 294 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobaculum Halobaculum sp. CBA1158
8673069 8673069 PRJNA1098727_P_NODE_14407_length_165_cov_0.896552_g14166_i0 PRJNA1098727 14407 165 0.896552 1.4793108 Haloferacaceae 1644056 Archaea Archaea 185 1.3e-42   NTclustered gi|1810670185|gb|CP048738.1| 2246 g14166 i0 87.349 31.7757575757576 166 15 99 4 2 164 1912714 1912552 Haloferax volcanii strain wsp1 chromosome, complete genome blastn 5243 185 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloferax Haloferax volcanii
9138715 9138715 PRJNA1098727_P_NODE_15408_length_163_cov_0.912281_g15167_i0 PRJNA1098727 15408 163 0.912281 1.48701803 Halorubrum sp. PV6 634157 Archaea Archaea 143 7.839999999999999e-30   NTclustered gi|1717503818|gb|CP030065.1| 634157 g15167 i0 90.09 2.22085889570552 111 9 67 2 53 162 280920 280811 Halorubrum sp. PV6 plasmid pHrrPV6, complete sequence blastn 362 143 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum sp. PV6
9947986 9947986 PRJNA1098727_P_NODE_13608_length_167_cov_0.881356_g13367_i0 PRJNA1098727 13608 167 0.881356 1.47186452 Halobacteriales 2235 Archaea Archaea 152 1.3399999999999998e-32   NTclustered gi|1864271697|gb|CP054709.1| 1853682 g13367 i0 83.436 36.311377245509 163 27 98 0 5 167 63468 63630 Halarchaeum sp. CBA1220 plasmid pCBA1220-02, complete sequence blastn 6064 152 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halarchaeum Halarchaeum sp. CBA1220
9947989 9947989 PRJNA1098727_P_NODE_14088_length_166_cov_0.888889_g13847_i0 PRJNA1098727 14088 166 0.888889 1.47555574 Halobacteriales 2235 Archaea Archaea 174 2.84e-39   NTclustered gi|1868817999|gb|CP058529.1| 2743090 g13847 i0 88.811 13.144578313253 143 14 86 2 23 164 2383853 2383994 Halorarum halophilum strain Gai3-2 chromosome, complete genome blastn 2182 174 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorarum Halorarum halophilum
18062803 18062803 PRJNA1098727_P_NODE_7615_length_224_cov_1.165714_g7374_i0 PRJNA1098727 7615 224 1.165714 2.61119936 Natribaculum luteum 1586232 Archaea Archaea 165 2.4500000000000002e-36   NTclustered gi|2224381014|gb|CP095397.1| 1586232 g7374 i0 87.413 9.15178571428571 143 18 64 0 82 224 800072 800214 Natribaculum luteum strain IBRC-M 10912 chromosome, complete genome blastn 2050 165 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natribaculum Natribaculum luteum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;