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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA1098727" and tax_clade = "Discoba"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Discoba · 10 ✖

bioproject 1

  • PRJNA1098727 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2761797 2761797 PRJNA1098727_P_NODE_14043_length_166_cov_0.888889_g13802_i0 PRJNA1098727 14043 166 0.888889 1.47555574 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 246 5.94e-61   NTclustered gi|290972772|ref|XM_002669079.1| 5762 g13802 i0 93.865 0.981927710843373 163 10 98 0 3 165 279 117 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_54415), partial mRNA blastn 163 246 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
3570357 3570357 PRJNA1098727_P_NODE_3723_length_344_cov_1.379661_g3482_i0 PRJNA1098727 3723 344 1.379661 4.74603384 Naegleria 5761 Heterolobosea other_Eukaryota 632 9.139999999999998e-177   NTclustered gi|2618963742|gb|OR769034.1| 5762 g3482 i0 100 23.6075581395349 342 0 99 0 2 343 3808 4149 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 8121 632 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6589197 6589197 PRJNA1098727_P_NODE_11066_length_182_cov_1.172932_g10825_i0 PRJNA1098727 11066 182 1.172932 2.13473624 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 228 2.4e-55   NTclustered gi|290971770|ref|XM_002668606.1| 5762 g10825 i0 94.558 3.15934065934066 147 8 81 0 2 148 754 900 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_60075), partial mRNA blastn 575 228 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
7863798 7863798 PRJNA1098727_P_NODE_12607_length_169_cov_2.100000_g12366_i0 PRJNA1098727 12607 169 2.1 3.549 Naegleria pringsheimi 234921 Heterolobosea other_Eukaryota 307 2.73e-79   NTclustered gi|2515557648|gb|OR045415.1| 234921 g12366 i0 99.408 66.491124260355 169 1 100 0 1 169 3691 3859 Naegleria pringsheimi strain Singh(s) rDNA-containing extrachromosomal element genomic sequence; 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 11237 307 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria pringsheimi
9138708 9138708 PRJNA1098727_P_NODE_14728_length_164_cov_0.904348_g14487_i0 PRJNA1098727 14728 164 0.904348 1.48313072 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 241 2.72e-59   NTclustered gi|290992662|ref|XM_002678907.1| 5762 g14487 i0 100 0.792682926829268 130 0 79 0 35 164 924 795 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_32381), partial mRNA blastn 130 241 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
12964944 12964944 PRJNA1098727_P_NODE_14451_length_165_cov_0.896552_g14210_i0 PRJNA1098727 14451 165 0.896552 1.4793108 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 259 7.57e-65   NTclustered gi|290996789|ref|XM_002680919.1| 5762 g14210 i0 95.122 0.993939393939394 164 8 99 0 1 164 2802 2965 Naegleria gruberi ATP dependent RNA helicase (NAEGRDRAFT_78640), partial mRNA blastn 164 259 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
12964963 12964963 PRJNA1098727_P_NODE_8491_length_211_cov_1.592593_g8250_i0 PRJNA1098727 8491 211 1.592593 3.36037123 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 372 1.25e-98   NTclustered gi|290975864|ref|XM_002670616.1| 5762 g8250 i0 98.571 56.6445497630332 210 3 99 0 2 211 1247 1038 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55913), mRNA blastn 11952 372 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13773195 13773195 PRJNA1098727_P_NODE_9971_length_192_cov_1.447552_g9730_i0 PRJNA1098727 9971 192 1.447552 2.77929984 Naegleria 5761 Heterolobosea other_Eukaryota 351 1.46e-92   NTclustered gi|32966202|gb|AY266314.1| 5762 g9730 i0 100 99.0520833333333 190 0 99 0 2 191 203 392 Naegleria gruberi 18S ribosomal RNA gene, partial sequence blastn 19018 351 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
19336874 19336874 PRJNA1098727_P_NODE_13116_length_168_cov_0.873950_g12875_i0 PRJNA1098727 13116 168 0.87395 1.468236 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 291 2.75e-74   NTclustered gi|290978665|ref|XM_002672010.1| 5762 g12875 i0 98.773 1.92857142857143 163 2 97 0 2 164 248 410 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82759), mRNA blastn 324 291 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23163455 23163455 PRJNA1098727_P_NODE_8639_length_209_cov_1.287500_g8398_i0 PRJNA1098727 8639 209 1.2875 2.690875 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 346 7.51e-91   NTclustered gi|290983374|ref|XM_002674358.1| 5762 g8398 i0 97.525 2.67942583732057 202 5 97 0 7 208 850 649 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82706), mRNA blastn 560 346 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;