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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA1097627" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1097627 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
207022 207022 PRJNA1097627_P_NODE_203601_length_241_cov_0.916667_g203308_i0 PRJNA1097627 203601 241 0.916667 2.20916747 Acholeplasma laidlawii 2148 Bacteria Bacteria 446 8.519999999999999e-121   NTclustered gi|2322007577|gb|CP103951.1| 2148 g203308 i0 100 71.0663900414938 241 0 100 0 1 241 775085 774845 Acholeplasma laidlawii strain JS42 chromosome, complete genome blastn 17127 446 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae Acholeplasma Acholeplasma laidlawii
1019675 1019675 PRJNA1097627_P_NODE_154461_length_249_cov_0.875000_g154168_i0 PRJNA1097627 154461 249 0.875 2.17875 Acholeplasma 2147 Bacteria Bacteria 455 1.47e-123   NTclustered gi|1403529253|emb|LS483439.1| 2148 g154168 i0 99.598 4 249 1 100 0 1 249 882418 882666 Acholeplasma laidlawii strain NCTC10116 genome assembly, chromosome: 1 blastn 996 455 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae Acholeplasma Acholeplasma laidlawii
3570266 3570266 PRJNA1097627_P_NODE_139603_length_251_cov_0.865169_g139310_i0 PRJNA1097627 139603 251 0.865169 2.17157419 Mesomycoplasma 2923352 Bacteria Bacteria 462 8.869999999999999e-126   NTclustered gi|1720621726|gb|CP035041.1| 2100 g139310 i0 100 17.8565737051793 250 0 99 0 1 250 466114 466363 Mesomycoplasma hyorhinis strain JF5820 chromosome, complete genome blastn 4482 462 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mesomycoplasma Mesomycoplasma hyorhinis
3570321 3570321 PRJNA1097627_P_NODE_72283_length_293_cov_1.400000_g71990_i0 PRJNA1097627 72283 293 1.4 4.102 Acholeplasma 2147 Bacteria Bacteria 531 2.86e-146   NTclustered gi|1403529253|emb|LS483439.1| 2148 g71990 i0 99.317 27.0170648464164 293 2 100 0 1 293 250492 250784 Acholeplasma laidlawii strain NCTC10116 genome assembly, chromosome: 1 blastn 7916 531 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae Acholeplasma Acholeplasma laidlawii
6582409 6582409 PRJNA1097627_P_NODE_147346_length_250_cov_0.870056_g147053_i0 PRJNA1097627 147346 250 0.870056 2.17514 Acholeplasma laidlawii 2148 Bacteria Bacteria 462 8.83e-126   NTclustered gi|2322007577|gb|CP103951.1| 2148 g147053 i0 100 4 250 0 100 0 1 250 130996 130747 Acholeplasma laidlawii strain JS42 chromosome, complete genome blastn 1000 462 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae Acholeplasma Acholeplasma laidlawii
7397577 7397577 PRJNA1097627_P_NODE_201986_length_241_cov_0.916667_g201693_i0 PRJNA1097627 201986 241 0.916667 2.20916747 Acholeplasma 2147 Bacteria Bacteria 390 4.05e-104   NTclustered gi|1403529253|emb|LS483439.1| 2148 g201693 i0 95.851 3 241 10 100 0 1 241 1159946 1159706 Acholeplasma laidlawii strain NCTC10116 genome assembly, chromosome: 1 blastn 723 390 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae Acholeplasma Acholeplasma laidlawii
11682800 11682800 PRJNA1097627_P_NODE_141570_length_251_cov_0.865169_g141277_i0 PRJNA1097627 141570 251 0.865169 2.17157419 Acholeplasma laidlawii 2148 Bacteria Bacteria 431 2.4999999999999996e-116   NTclustered gi|2322007577|gb|CP103951.1| 2148 g141277 i0 97.61 2 251 6 100 0 1 251 1260872 1261122 Acholeplasma laidlawii strain JS42 chromosome, complete genome blastn 502 431 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae Acholeplasma Acholeplasma laidlawii
13773123 13773123 PRJNA1097627_P_NODE_196811_length_242_cov_0.911243_g196518_i0 PRJNA1097627 196811 242 0.911243 2.20520806 Mesomycoplasma 2923352 Bacteria Bacteria 448 2.3799999999999995e-121   NTclustered gi|1720621726|gb|CP035041.1| 2100 g196518 i0 100 15 242 0 100 0 1 242 545744 545985 Mesomycoplasma hyorhinis strain JF5820 chromosome, complete genome blastn 3630 448 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mesomycoplasma Mesomycoplasma hyorhinis
15507411 15507411 PRJNA1097627_P_NODE_154553_length_249_cov_0.875000_g154260_i0 PRJNA1097627 154553 249 0.875 2.17875 Hujiaoplasma nucleasis 2725268 Bacteria Bacteria 460 3.16e-125   NTclustered gi|1880319116|gb|CP051151.1| 2725268 g154260 i0 100 4.1566265060241 249 0 100 0 1 249 1443562 1443810 Hujiaoplasma nucleasis strain zrk29 chromosome, complete genome blastn 1035 460 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Candidatus Izemoplasmatales Hujiaoplasmataceae Hujiaoplasma Hujiaoplasma nucleasis
20146120 20146120 PRJNA1097627_P_NODE_152756_length_249_cov_0.875000_g152463_i0 PRJNA1097627 152756 249 0.875 2.17875 Mesomycoplasma 2923352 Bacteria Bacteria 460 3.16e-125   NTclustered gi|2713084492|gb|CP150431.1| 2100 g152463 i0 100 15 249 0 100 0 1 249 539219 538971 Mesomycoplasma hyorhinis strain Nahrain chromosome blastn 3735 460 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mesomycoplasma Mesomycoplasma hyorhinis
21421771 21421771 PRJNA1097627_P_NODE_172417_length_246_cov_0.890173_g172124_i0 PRJNA1097627 172417 246 0.890173 2.18982558 Mesomycoplasma 2923352 Bacteria Bacteria 455 1.4500000000000002e-123   NTclustered gi|1720621726|gb|CP035041.1| 2100 g172124 i0 100 15.8983739837398 246 0 100 0 1 246 383158 383403 Mesomycoplasma hyorhinis strain JF5820 chromosome, complete genome blastn 3911 455 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mesomycoplasma Mesomycoplasma hyorhinis
23972006 23972006 PRJNA1097627_P_NODE_140639_length_251_cov_0.865169_g140346_i0 PRJNA1097627 140639 251 0.865169 2.17157419 Mesomycoplasma 2923352 Bacteria Bacteria 464 2.47e-126   NTclustered gi|1720621726|gb|CP035041.1| 2100 g140346 i0 100 15 251 0 100 0 1 251 372112 372362 Mesomycoplasma hyorhinis strain JF5820 chromosome, complete genome blastn 3765 464 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mesomycoplasma Mesomycoplasma hyorhinis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;