RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1095825" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1095825 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14229527 14229527 PRJNA1095825_P_NODE_255832_length_248_cov_0.880000_g252769_i0 PRJNA1095825 255832 248 0.88 2.1824 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 239 1.6e-58   NTclustered gi|1850839647|gb|CP053446.1| 2026749 g252769 i0 84.362 0.979838709677419 243 38 98 0 1 243 2510621 2510863 Ignavibacteriae bacterium isolate IGN2 chromosome blastn 243 239 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
18052374 18052374 PRJNA1095825_P_NODE_243755_length_250_cov_0.870056_g240692_i0 PRJNA1095825 243755 250 0.870056 2.17514 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 183 7.7e-42   NTclustered gi|1850839647|gb|CP053446.1| 2026749 g240692 i0 80.851 0.94 235 43 94 2 1 234 916625 916392 Ignavibacteriae bacterium isolate IGN2 chromosome blastn 235 183 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;