RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1095825" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 8 ✖

bioproject 1

  • PRJNA1095825 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
200718 200718 PRJNA1095825_P_NODE_253101_length_248_cov_0.988571_g250038_i0 PRJNA1095825 253101 248 0.988571 2.45165608 Deinococcus radiomollis 468916 Bacteria Bacteria 416 6.9e-112   NTclustered gi|2865409981|gb|CP129906.1| 468916 g250038 i0 96.813 228.487903225806 251 5 100 3 1 248 1000946 1001196 Deinococcus radiomollis strain PO-04-20-132 chromosome, complete genome blastn 56665 416 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus radiomollis
2294961 2294961 PRJNA1095825_P_NODE_253362_length_248_cov_0.880000_g250299_i0 PRJNA1095825 253362 248 0.88 2.1824 Deinococcus 1298 Bacteria Bacteria 407 4.16e-109   NTclustered gi|2264081587|gb|CP094462.1| 1299 g250299 i0 96.721 21.3508064516129 244 8 98 0 1 244 2295300 2295543 Deinococcus radiodurans strain BRD125 chromosome 1, complete sequence blastn 5295 407 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus radiodurans
8672649 8672649 PRJNA1095825_P_NODE_204047_length_274_cov_0.950249_g200984_i0 PRJNA1095825 204047 274 0.950249 2.60368226 Deinococcus 1298 Bacteria Bacteria 484 2.0899999999999994e-132   NTclustered gi|2264081587|gb|CP094462.1| 1299 g200984 i0 98.54 293.806569343066 274 4 100 0 1 274 879584 879857 Deinococcus radiodurans strain BRD125 chromosome 1, complete sequence blastn 80503 484 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus radiodurans
11223036 11223036 PRJNA1095825_P_NODE_285629_length_243_cov_0.905882_g282566_i0 PRJNA1095825 285629 243 0.905882 2.20129326 Thermus 270 Bacteria Bacteria 444 3.09e-120   NTclustered gi|2090198728|gb|CP082325.1| 274 g282566 i0 99.588 10 243 1 100 0 1 243 51789 51547 Thermus thermophilus strain N-1 plasmid unnamed2, complete sequence blastn 2430 444 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus thermophilus
15047130 15047130 PRJNA1095825_P_NODE_206932_length_271_cov_2.535354_g203869_i0 PRJNA1095825 206932 271 2.535354 6.87080934 Truepera 332248 Bacteria Bacteria 54.7 0.007   NTclustered gi|2573973991|gb|CP133611.1| 332249 g203869 i0 100 0.214022140221402 29 0 11 0 230 258 3108346 3108318 Truepera radiovictrix strain CIP 108686 chromosome, complete genome blastn 58 54.7 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
15047200 15047200 PRJNA1095825_P_NODE_241812_length_250_cov_0.870056_g238749_i0 PRJNA1095825 241812 250 0.870056 2.17514 Thermus 270 Bacteria Bacteria 451 1.91e-122   NTclustered gi|2049910225|gb|CP076325.1| 88190 g238749 i0 99.2 48.684 250 2 100 0 1 250 487378 487129 MAG: Thermus antranikianii isolate RBS10-92 chromosome, complete genome blastn 12171 451 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus antranikianii
16778772 16778772 PRJNA1095825_P_NODE_71434_length_448_cov_1.402667_g68371_i0 PRJNA1095825 71434 448 1.402667 6.28394816 Deinococcus sp. QL22 2939437 Bacteria Bacteria 726 0   NTclustered gi|2238957582|gb|CP097149.1| 2939437 g68371 i0 95.982 212.247767857143 448 16 99 2 1 447 1507971 1508417 Deinococcus sp. QL22 chromosome, complete genome blastn 95087 726 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. QL22
20602856 20602856 PRJNA1095825_P_NODE_80517_length_422_cov_1.338109_g77454_i0 PRJNA1095825 80517 422 1.338109 5.64681998 Deinococcus puniceus 1182568 Bacteria Bacteria 623 6.869999999999999e-174   NTclustered gi|1028459476|gb|CP011387.1| 1182568 g77454 i0 93.396 252.144549763033 424 23 100 5 1 422 70898 71318 Deinococcus puniceus strain DY1, complete genome blastn 106405 623 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus puniceus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;