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contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJNA1095825" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 19 ✖

bioproject 1

  • PRJNA1095825 · 19 ✖

analysis 1

  • blastn · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
199876 199876 PRJNA1095825_P_NODE_152401_length_315_cov_1.909091_g149338_i0 PRJNA1095825 152401 315 1.909091 6.01363665 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 505 1.8799999999999995e-138   NTclustered gi|110277428|gb|DQ662856.1| 151077 g149338 i0 95.833 80.5365079365079 312 13 99 0 2 313 1075 1386 Chilodonella uncinata heat shock protein 90 gene, partial cds; macronuclear blastn 25369 505 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
200377 200377 PRJNA1095825_P_NODE_214561_length_266_cov_1.404145_g211498_i0 PRJNA1095825 214561 266 1.404145 3.7350257 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 492 1.2099999999999999e-134   NTclustered gi|1202135013|gb|KY476314.1| 151077 g211498 i0 100 96.6654135338346 266 0 100 0 1 266 13 278 Chilodonella uncinata 18S ribosomal RNA gene, partial sequence blastn 25713 492 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
1476074 1476074 PRJNA1095825_P_NODE_49962_length_541_cov_1.307692_g46905_i0 PRJNA1095825 49962 541 1.307692 7.07461372 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 289359 SAR_Eukaryotes SAR_Eukaryotes 994 0   NTclustered gi|53829555|gb|AY582830.1| 289359 g46905 i0 99.815 51.9907578558226 541 1 100 0 1 541 1147 607 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 ef1a gene, partial cds blastn 28127 994 1 Eukaryota Sar             Stramenopile sp. ex Nuclearia delicatula CCAP1552/1
1476487 1476487 PRJNA1095825_P_NODE_93362_length_393_cov_1.443750_g90299_i0 PRJNA1095825 93362 393 1.44375 5.6739375 Bilabrum cf. latius 3115832 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.01   NTclustered gi|2918369601|emb|OZ237767.1| 3115832 g90299 i0 100 0.0737913486005089 29 0 7 0 114 142 291350 291322 Bilabrum cf. latius genome assembly, chromosome: 33 blastn 29 54.7 1 Eukaryota Sar     Bigyra Bicosoecida   Bilabrum Bilabrum cf. latius
5303826 5303826 PRJNA1095825_P_NODE_267145_length_246_cov_0.890173_g264082_i0 PRJNA1095825 267145 246 0.890173 2.18982558 Halamphora calidilacuna 2133758 SAR_Eukaryotes SAR_Eukaryotes 276 1.21e-69   NTclustered gi|1735236539|ref|NC_044464.1| 2133758 g264082 i0 89.189 10.1707317073171 222 22 90 2 1 221 49984 49764 Halamphora calidilacuna chloroplast, complete genome blastn 2502 276 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Amphipleuraceae Halamphora Halamphora calidilacuna
6577899 6577899 PRJNA1095825_P_NODE_161126_length_307_cov_1.641026_g158063_i0 PRJNA1095825 161126 307 1.641026 5.03794982 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 568 2.3e-157   NTclustered gi|13194559|gb|AF300281.1|AF300281 151077 g158063 i0 100 101.247557003257 307 0 100 0 1 307 518 824 Chilodonella uncinata clone 1 18S small subunit ribosomal RNA gene, partial sequence blastn 31083 568 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
6579707 6579707 PRJNA1095825_P_NODE_77686_length_429_cov_3.432584_g74623_i0 PRJNA1095825 77686 429 3.432584 14.72578536 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 763 0   NTclustered gi|300676714|gb|GQ377691.1| 151077 g74623 i0 98.834 51.5058275058275 429 4 99 1 2 429 450 22 Chilodonella uncinata rps22a (rps22a) mRNA, complete cds blastn 22096 763 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
7852340 7852340 PRJNA1095825_P_NODE_113227_length_359_cov_2.132867_g110164_i0 PRJNA1095825 113227 359 2.132867 7.65699253 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 606 5.79e-169   NTclustered gi|301014695|gb|GQ377692.1| 151077 g110164 i0 97.207 62.3732590529248 358 10 99 0 1 358 22 379 Chilodonella uncinata ribosomal protein S23a-like (rps23a) mRNA, complete sequence blastn 22392 606 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
9128003 9128003 PRJNA1095825_P_NODE_205408_length_273_cov_1.005000_g202345_i0 PRJNA1095825 205408 273 1.005 2.74365 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 488 1.6099999999999996e-133   NTclustered gi|347439301|gb|JN111999.1| 151077 g202345 i0 98.901 13.2747252747253 273 3 100 0 1 273 516 244 Chilodonella uncinata strain USA_WH actin gene, partial cds; macronuclear blastn 3624 488 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
9129072 9129072 PRJNA1095825_P_NODE_42948_length_588_cov_3.246602_g39902_i0 PRJNA1095825 42948 588 3.246602 19.09001976 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 1003 0   NTclustered gi|110645063|gb|DQ665311.1| 151077 g39902 i0 97.449 34.687074829932 588 15 100 0 1 588 343 930 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 20396 1003 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
10403868 10403868 PRJNA1095825_P_NODE_228429_length_256_cov_1.617486_g225366_i0 PRJNA1095825 228429 256 1.617486 4.14076416 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 331 2.67e-86   NTclustered gi|110645006|gb|DQ665938.1| 151077 g225366 i0 92.275 7.8828125 233 18 91 0 1 233 563 795 Chilodonella uncinata actin gene, partial cds; macronuclear blastn 2018 331 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
12498157 12498157 PRJNA1095825_P_NODE_122070_length_348_cov_0.974545_g119007_i0 PRJNA1095825 122070 348 0.974545 3.3914166 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 590 5.649999999999998e-164   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g119007 i0 97.399 7.70977011494253 346 9 99 0 1 346 463 808 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 2683 590 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
15503107 15503107 PRJNA1095825_P_NODE_215933_length_265_cov_1.484375_g212870_i0 PRJNA1095825 215933 265 1.484375 3.93359375 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 490 4.3299999999999986e-134   NTclustered gi|323690576|gb|GU935635.1| 88167 g212870 i0 100 98.0981132075472 265 0 100 0 1 265 1536 1800 Poteriochroomonas malhamensis strain SAG 933.1c 28S ribosomal RNA gene, partial sequence blastn 25996 490 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
16777433 16777433 PRJNA1095825_P_NODE_205694_length_272_cov_1.829146_g202631_i0 PRJNA1095825 205694 272 1.829146 4.97527712 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.49e-4   NTclustered gi|813220221|ref|XM_012356098.1| 695850 g202631 i0 97.143 0.128676470588235 35 1 13 0 59 93 171 137 Saprolegnia parasitica CBS 223.65 hypothetical protein partial mRNA blastn 35 60.2 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
18051844 18051844 PRJNA1095825_P_NODE_187555_length_285_cov_2.066038_g184492_i0 PRJNA1095825 187555 285 2.066038 5.8882083 Plasmodium gallinaceum 5849 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.026   NTclustered gi|1620111922|ref|XM_028670266.1| 5849 g184492 i0 100 0.0982456140350877 28 0 10 0 179 206 392 419 Plasmodium gallinaceum glutamate dehydrogenase, putative (GDH3), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
20601398 20601398 PRJNA1095825_P_NODE_200737_length_276_cov_1.339901_g197674_i0 PRJNA1095825 200737 276 1.339901 3.69812676 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 289359 SAR_Eukaryotes SAR_Eukaryotes 505 1.62e-138   NTclustered gi|53829589|gb|AY582847.1| 289359 g197674 i0 99.638 89.8333333333333 276 1 100 0 1 276 776 501 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 actin gene, partial cds blastn 24794 505 1 Eukaryota Sar             Stramenopile sp. ex Nuclearia delicatula CCAP1552/1
21878246 21878246 PRJNA1095825_P_NODE_50618_length_537_cov_1.327586_g47561_i0 PRJNA1095825 50618 537 1.327586 7.12913682 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 115 6.6300000000000006e-21   NTclustered gi|160358922|gb|EU252544.1| 88456 g47561 i0 79.191 16.9478584729981 173 31 32 4 60 232 1507 1674 Cyclospora cayetanensis 28S large subunit ribosomal RNA gene, partial sequence blastn 9101 115 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
23152517 23152517 PRJNA1095825_P_NODE_194419_length_280_cov_1.985507_g191356_i0 PRJNA1095825 194419 280 1.985507 5.5594196 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 398 2.8799999999999993e-106   NTclustered gi|110645063|gb|DQ665311.1| 151077 g191356 i0 97.034 43.7607142857143 236 7 84 0 45 280 1205 970 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 12253 398 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
23153754 23153754 PRJNA1095825_P_NODE_56239_length_507_cov_3.366359_g53180_i0 PRJNA1095825 56239 507 3.366359 17.06744013 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 815 0   NTclustered gi|300676719|gb|GQ377693.1| 151077 g53180 i0 95.661 59.8737672583826 507 22 100 0 1 507 16 522 Chilodonella uncinata gcr5-like mRNA, partial sequence blastn 30356 815 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;