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contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJNA1093380" and tax_clade = "Sar"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Sar · 22 ✖

bioproject 1

  • PRJNA1093380 · 22 ✖

analysis 1

  • blastn · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1473771 1473771 PRJNA1093380_P_NODE_5922_length_286_cov_1.084507_g5816_i0 PRJNA1093380 5922 286 1.084507 3.10169002 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 213 1.15e-50   NTclustered gi|2795040101|ref|XM_067937224.1| 4785 g5816 i0 85.366 295.524475524476 205 30 72 0 79 283 683 479 Phytophthora cinnamomi Polyubiquitin (IUM83_12589), partial mRNA blastn 84520 213 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
2749875 2749875 PRJNA1093380_P_NODE_3083_length_344_cov_1.136531_g2977_i0 PRJNA1093380 3083 344 1.136531 3.90966664 Actinosphaerium nucleofilum 238767 SAR_Eukaryotes SAR_Eukaryotes 342 1.7199999999999994e-89   NTclustered gi|33089895|gb|AY283757.1| 238767 g2977 i0 84.682 98.8866279069767 346 49 100 4 1 344 596 253 Actinosphaerium nucleofilum isolate Anu4_3 actin gene, partial cds blastn 34017 342 1 Eukaryota Sar     Actinophryidae     Actinosphaerium Actinosphaerium nucleofilum
4025682 4025682 PRJNA1093380_P_NODE_10544_length_258_cov_6.329730_g10438_i0 PRJNA1093380 10544 258 6.32973 16.3307034 Plasmodium gaboni 647221 SAR_Eukaryotes SAR_Eukaryotes 62.1 3.9e-5   NTclustered gi|1084815949|ref|XM_018784916.1| 647221 g10438 i0 100 17.6046511627907 33 0 13 0 143 175 5403 5371 Plasmodium gaboni E3 ubiquitin-protein ligase partial mRNA blastn 4542 62.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gaboni
4025862 4025862 PRJNA1093380_P_NODE_704_length_661_cov_3.523810_g603_i0 PRJNA1093380 704 661 3.52381 23.2923841 Spumella sp. OF-40 1432661 SAR_Eukaryotes SAR_Eukaryotes 761 0   NTclustered gi|677286268|gb|KF997856.1| 1432661 g603 i0 87.462 86.1875945537065 662 81 100 2 1 661 1287 627 Spumella sp. OF-40 translation elongation factor 1-alpha (EF1A) mRNA, complete cds blastn 56970 761 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Spumella Spumella sp. OF-40
4025914 4025914 PRJNA1093380_P_NODE_9704_length_264_cov_1.209424_g9598_i0 PRJNA1093380 9704 264 1.209424 3.19287936 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 148 2.9899999999999995e-31   NTclustered gi|166043101|emb|CU357747.1| 100861 g9598 i0 84.314 3.92045454545455 153 22 58 2 16 167 742 893 Aphanomyces euteiches cDNA blastn 1035 148 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
5302025 5302025 PRJNA1093380_P_NODE_3685_length_322_cov_1.236948_g3579_i0 PRJNA1093380 3685 322 1.236948 3.98297256 Poteriospumella lacustris 1117027 SAR_Eukaryotes SAR_Eukaryotes 584 2.41e-162   NTclustered gi|2295553597|gb|OP378946.1| 1117027 g3579 i0 99.379 100.400621118012 322 2 100 0 1 322 1329 1650 Poteriospumella lacustris isolate 1532 large subunit ribosomal RNA gene, partial sequence blastn 32329 584 1 Eukaryota Sar     Chrysophyceae Chromulinales Dinobryaceae Poteriospumella Poteriospumella lacustris
6122360 6122360 PRJNA1093380_P_NODE_705_length_661_cov_2.892857_g604_i0 PRJNA1093380 705 661 2.892857 19.12178477 Spumella 89043 SAR_Eukaryotes SAR_Eukaryotes 749 0   NTclustered gi|2055919756|gb|MZ420314.1| 1955568 g604 i0 87.444 89.4236006051437 669 61 100 21 1 661 1967 1314 Spumella sp. strain Woeam021018A5 large subunit ribosomal RNA gene, partial sequence blastn 59109 749 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Spumella Spumella sp.
6577086 6577086 PRJNA1093380_P_NODE_1906_length_411_cov_2.230769_g1800_i0 PRJNA1093380 1906 411 2.230769 9.16846059 Spumella-like flagellate 376hm 373013 SAR_Eukaryotes SAR_Eukaryotes 407 7.319999999999999e-109   NTclustered gi|161015639|gb|EF577231.1| 373013 g1800 i0 84.729 97.2092457420925 406 62 99 0 6 411 772 367 Spumella-like flagellate 376hm alpha-tubulin gene, partial cds blastn 39953 407 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae   Spumella-like flagellate 376hm
6577177 6577177 PRJNA1093380_P_NODE_926_length_574_cov_2.546906_g823_i0 PRJNA1093380 926 574 2.546906 14.61924044 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 289359 SAR_Eukaryotes SAR_Eukaryotes 773 0   NTclustered gi|53829589|gb|AY582847.1| 289359 g823 i0 90.957 85.8658536585366 575 50 100 2 1 574 732 159 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 actin gene, partial cds blastn 49287 773 1 Eukaryota Sar             Stramenopile sp. ex Nuclearia delicatula CCAP1552/1
7851875 7851875 PRJNA1093380_P_NODE_2767_length_357_cov_1.683099_g2661_i0 PRJNA1093380 2767 357 1.683099 6.00866343 Spumella-like flagellate Got220 441774 SAR_Eukaryotes SAR_Eukaryotes 331 3.88e-86   NTclustered gi|161015585|gb|EF577199.1| 441774 g2661 i0 83.427 91.0896358543417 356 59 99 0 1 356 784 429 Spumella-like flagellate Got220 beta-tubulin-like gene, partial sequence blastn 32519 331 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae   Spumella-like flagellate Got220
7851907 7851907 PRJNA1093380_P_NODE_5047_length_291_cov_2.059633_g4941_i0 PRJNA1093380 5047 291 2.059633 5.99353203 Plasmodium cynomolgi 5827 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.027   NTclustered gi|457874729|ref|XM_004224026.1| 1120755 g4941 i0 100 0.0962199312714777 28 0 10 0 230 257 290 263 Plasmodium cynomolgi strain B hypothetical protein (PCYB_126920) mRNA, complete cds blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium cynomolgi
9126842 9126842 PRJNA1093380_P_NODE_428_length_869_cov_4.071608_g339_i0 PRJNA1093380 428 869 4.071608 35.38227352 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 289359 SAR_Eukaryotes SAR_Eukaryotes 1024 0   NTclustered gi|53829555|gb|AY582830.1| 289359 g339 i0 88.407 61.5339470655926 854 93 98 6 19 869 1238 388 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 ef1a gene, partial cds blastn 53473 1024 1 Eukaryota Sar             Stramenopile sp. ex Nuclearia delicatula CCAP1552/1
10402444 10402444 PRJNA1093380_P_NODE_1889_length_413_cov_2.550000_g1783_i0 PRJNA1093380 1889 413 2.55 10.5315 Spumella-like flagellate 1006 373018 SAR_Eukaryotes SAR_Eukaryotes 333 1.2700000000000001e-86   NTclustered gi|161015636|gb|EF577229.1| 373018 g1783 i0 81.418 84.9733656174334 409 74 99 2 6 413 585 178 Spumella-like flagellate 1006 alpha-tubulin-like gene, partial sequence blastn 35094 333 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae   Spumella-like flagellate 1006
11677781 11677781 PRJNA1093380_P_NODE_2530_length_368_cov_1.542373_g2424_i0 PRJNA1093380 2530 368 1.542373 5.67593264 Isotricha intestinalis 47897 SAR_Eukaryotes SAR_Eukaryotes 235 3.23e-57   NTclustered gi|92790151|emb|AJ965261.1| 47897 g2424 i0 85.841 63.0815217391304 226 26 61 6 145 368 915 694 Isotricha intestinalis partial mRNA for Polyubiqutin 1 (polyubiqutin 1 gene) blastn 23214 235 1 Eukaryota Sar   Ciliophora Litostomatea Vestibuliferida Isotrichidae Isotricha Isotricha intestinalis
12952894 12952894 PRJNA1093380_P_NODE_17811_length_228_cov_3.561290_g17705_i0 PRJNA1093380 17811 228 3.56129 8.1197412 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 303 5.08e-78   NTclustered gi|158347525|gb|EU047814.1| 151077 g17705 i0 91.071 97.5833333333333 224 20 98 0 2 225 16 239 Chilodonella uncinata clone Shared_P1 beta-tubulin gene, partial cds; macronuclear blastn 22249 303 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
14227843 14227843 PRJNA1093380_P_NODE_17032_length_241_cov_0.916667_g16926_i0 PRJNA1093380 17032 241 0.916667 2.20916747 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 156 1.6100000000000002e-33   NTclustered gi|813142527|ref|XM_012343931.1| 695850 g16926 i0 79.452 98.6721991701245 219 45 91 0 1 219 441 659 Saprolegnia parasitica CBS 223.65 60S ribosomal protein L3 mRNA blastn 23780 156 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
14227848 14227848 PRJNA1093380_P_NODE_1732_length_428_cov_1.138028_g1626_i0 PRJNA1093380 1732 428 1.138028 4.87075984 Spumella lacusvadosi 1841646 SAR_Eukaryotes SAR_Eukaryotes 745 0   NTclustered gi|2055919768|gb|MZ420326.1| 1841646 g1626 i0 98.804 95.9415887850467 418 5 98 0 11 428 1826 1409 Spumella lacusvadosi strain Dongmak102320A2 large subunit ribosomal RNA gene, partial sequence blastn 41063 745 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Spumella Spumella lacusvadosi
14227872 14227872 PRJNA1093380_P_NODE_2912_length_351_cov_1.381295_g2806_i0 PRJNA1093380 2912 351 1.381295 4.84834545 Bilabrum cf. latius 3115832 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.033   NTclustered gi|2918369592|emb|OZ237758.1| 3115832 g2806 i0 100 0.0797720797720798 28 0 8 0 99 126 206615 206642 Bilabrum cf. latius genome assembly, chromosome: 24 blastn 28 52.8 1 Eukaryota Sar     Bigyra Bicosoecida   Bilabrum Bilabrum cf. latius
14227915 14227915 PRJNA1093380_P_NODE_6832_length_280_cov_1.487923_g6726_i0 PRJNA1093380 6832 280 1.487923 4.1661844 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 230 1.1099999999999995e-55   NTclustered gi|813102101|ref|XM_012338325.1| 695850 g6726 i0 83.27 62.4535714285714 263 30 91 10 1 256 516 261 Saprolegnia parasitica CBS 223.65 ATP synthase subunit beta partial mRNA blastn 17487 230 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
16776249 16776249 PRJNA1093380_P_NODE_214_length_1209_cov_2.466549_g159_i0 PRJNA1093380 214 1209 2.466549 29.82057741 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 289359 SAR_Eukaryotes SAR_Eukaryotes 846 0   NTclustered gi|53829555|gb|AY582830.1| 289359 g159 i0 81.262 82.6732837055418 1062 185 87 14 1 1055 184 1238 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 ef1a gene, partial cds blastn 99952 846 1 Eukaryota Sar             Stramenopile sp. ex Nuclearia delicatula CCAP1552/1
23151461 23151461 PRJNA1093380_P_NODE_3439_length_330_cov_2.311284_g3333_i0 PRJNA1093380 3439 330 2.311284 7.6272372 Aphanomyces sinensis 1125843 SAR_Eukaryotes SAR_Eukaryotes 283 1.01e-71   NTclustered gi|2813228406|dbj|LC754346.1| 1125843 g3333 i0 82.335 94.0272727272727 334 51 100 7 1 330 513 184 Aphanomyces sinensis NBRC 106581 btub gene for beta-tubulin, partial cds blastn 31029 283 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces sinensis
25245570 25245570 PRJNA1093380_P_NODE_1500_length_453_cov_2.810526_g1395_i0 PRJNA1093380 1500 453 2.810526 12.73168278 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 407 8.129999999999999e-109   NTclustered gi|161734|gb|L01415.1|TETBTUBUA 5911 g1395 i0 83.002 95.9911699779249 453 73 99 4 3 453 950 1400 Tetrahymena thermophila beta-tubulin (BTU1) gene, complete cds blastn 43484 407 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;