RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1093008" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1093008 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8672275 8672275 PRJNA1093008_S_NODE_51967_length_290_cov_2.884793_g51640_i0 PRJNA1093008 51967 290 2.884793 8.3658997 Halorussus 1070314 Archaea Archaea 503 6.17e-138   NTclustered gi|2234308622|gb|CP096658.1| 2937524 g51640 i0 97.931 140.058620689655 290 6 100 0 1 290 1315870 1315581 Halorussus gelatinilyticus strain XZYJT40 chromosome, complete genome blastn 40617 508 0.990157480314961 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Halorussus Halorussus gelatinilyticus
10401833 10401833 PRJNA1093008_S_NODE_34049_length_327_cov_1.515748_g33722_i0 PRJNA1093008 34049 327 1.515748 4.95649596 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 377 4.47e-100   NTclustered gi|937513727|gb|CP012850.1| 1353260 g33722 i0 87.805 1.00305810397554 328 33 100 5 1 327 2830592 2830271 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 328 377 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
12952263 12952263 PRJNA1093008_S_NODE_34471_length_326_cov_1.521739_g34144_i0 PRJNA1093008 34471 326 1.521739 4.96086914 uncultured archaeon 115547 Archaea Archaea 52.8 0.031   NTclustered gi|765559593|gb|KP308642.1| 115547 g34144 i0 96.774 0.0950920245398773 31 1 10 0 179 209 61878 61848 Uncultured archaeon clone RBG_13_scaffold_69 genomic sequence blastn 31 52.8 1 Archaea               uncultured archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;