RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1093008" and tax_phylum = "Nucleocytoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Nucleocytoviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1093008 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12952758 12952758 PRJNA1093008_S_NODE_95951_length_241_cov_0.916667_g95624_i0 PRJNA1093008 95951 241 0.916667 2.20916747 Asfivirus haemorrhagiae 3426474 Viruses Viruses 69.4 2.15e-7   NTclustered gi|1992385840|gb|MT956648.1| 10497 g95624 i0 95.455 1.08713692946058 44 0 20 2 123 165 68209 68251 African swine fever virus isolate Uvira B53 blastn 262 69.4 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Asfuvirales Asfarviridae Asfivirus Asfivirus haemorrhagiae
12952780 12952780 PRJNA1093008_S_NODE_98511_length_233_cov_3.975000_g98184_i0 PRJNA1093008 98511 233 3.975 9.26175 Orthopoxvirus monkeypox 3431483 Viruses Viruses 54.7 0.006   NTclustered gi|2309594316|gb|OP536747.1| 10244 g98184 i0 100 12.4463519313305 29 0 12 0 130 158 119274 119302 Monkeypox virus isolate 9000365, partial genome blastn 2900 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox
23150845 23150845 PRJNA1093008_S_NODE_41159_length_311_cov_1.294118_g40832_i0 PRJNA1093008 41159 311 1.294118 4.02470698 Erythrocytic necrosis virus 1543320 Viruses Viruses 244 4.47e-60   NTclustered gi|1624806707|gb|MK638720.1| 1543320 g40832 i0 90.374 4.5048231511254 187 17 60 1 21 207 311 126 Erythrocytic necrosis virus isolate SEQ_18 putative RNA-dependent DNA polymerase mRNA, partial cds blastn 1401 244 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;