RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1093008" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1093008 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4847116 4847116 PRJNA1093008_S_NODE_56684_length_283_cov_1.795238_g56357_i0 PRJNA1093008 56684 283 1.795238 5.08052354 Rhizopus 4842 Fungi Fungi 481 2.81e-131   NTclustered gi|1493534650|gb|MK070014.1| 4846 g56357 i0 99.621 91.5936395759717 264 0 93 1 1 263 280 17 Rhizopus stolonifer strain M7RJF large subunit ribosomal RNA gene, partial sequence blastn 25921 481 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
5301304 5301304 PRJNA1093008_S_NODE_26165_length_350_cov_1.111913_g25838_i0 PRJNA1093008 26165 350 1.111913 3.8916955 Calcarisporiella thermophila 911321 Fungi Fungi 100 1.16e-16   NTclustered gi|2837853990|ref|XM_069392317.1| 911321 g25838 i0 78.808 0.431428571428571 151 30 43 2 3 152 316 465 Calcarisporiella thermophila 60S ribosomal protein uL23 (VTP21DRAFT_2153), partial mRNA blastn 151 100 1 Eukaryota Opisthokonta Fungi Mucoromycota   Calcarisporiellales Calcarisporiellaceae Calcarisporiella Calcarisporiella thermophila
6576443 6576443 PRJNA1093008_S_NODE_40206_length_313_cov_1.283333_g39879_i0 PRJNA1093008 40206 313 1.283333 4.01683229 Rhizopus microsporus 58291 Fungi Fungi 76.8 1.74e-9   NTclustered gi|1331188339|ref|XM_023611067.1| 1340429 g39879 i0 95.745 1.39936102236422 47 2 15 0 27 73 568 614 Rhizopus microsporus ATCC 52813 large subunit ribosomal protein L9e, variant (RHIMIDRAFT_254038), mRNA blastn 438 76.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus
6576641 6576641 PRJNA1093008_S_NODE_66246_length_269_cov_3.387755_g65919_i0 PRJNA1093008 66246 269 3.387755 9.11306095 Glomus sp. Tf 2-16 262042 Fungi Fungi 492 1.23e-134   NTclustered gi|41353938|gb|AY522919.1| 262042 g65919 i0 99.628 67.4423791821561 269 1 100 0 1 269 32 300 Glomus sp. Tf 2-16 26S ribosomal RNA gene, partial sequence blastn 18142 492 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Glomus Glomus sp. Tf 2-16

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;