RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1093008" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1093008 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
198774 198774 PRJNA1093008_S_NODE_70121_length_264_cov_2.638743_g69794_i0 PRJNA1093008 70121 264 2.638743 6.96628152 Hydra vulgaris 6087 Cnidaria other_Eukaryota 52.8 0.024   NTclustered gi|2744791770|ref|XR_010645119.1| 6087 g69794 i0 96.875 0.121212121212121 32 0 12 1 1 32 223 193 PREDICTED: Hydra vulgaris uncharacterized LOC124818844 (LOC124818844), ncRNA blastn 32 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
6576631 6576631 PRJNA1093008_S_NODE_64666_length_271_cov_14.803030_g64339_i0 PRJNA1093008 64666 271 14.80303 40.1162113 Nemalecium lighti 1769417 Cnidaria other_Eukaryota 128 4.01e-25   NTclustered gi|984932204|gb|KT757146.1| 1769417 g64339 i0 89.216 13.4243542435424 102 11 38 0 167 268 2251 2352 Nemalecium lighti voucher LEM m3x S17 large subunit 28S ribosomal RNA gene, partial sequence blastn 3638 128 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Haleciidae Nemalecium Nemalecium lighti
8672305 8672305 PRJNA1093008_S_NODE_62727_length_274_cov_2.059701_g62400_i0 PRJNA1093008 62727 274 2.059701 5.64358074 Metazoa 33208 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2917940712|emb|OZ237560.1| 6108 g62400 i0 100 6.28102189781022 30 0 11 0 37 66 1512231 1512202 Anemonia sulcata genome assembly, chromosome: 6 blastn 1721 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
9126327 9126327 PRJNA1093008_S_NODE_53388_length_288_cov_1.790698_g53061_i0 PRJNA1093008 53388 288 1.790698 5.15721024 Pocillopora verrucosa 203993 Cnidaria other_Eukaryota 52.8 0.027   NTclustered gi|2751537736|ref|XM_066164102.1| 203993 g53061 i0 100 0.0972222222222222 28 0 10 0 119 146 1638 1611 PREDICTED: Pocillopora verrucosa uncharacterized protein (LOC136279815), transcript variant X3, mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora verrucosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;