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contig_metadata

15,406 rows where analysis = "blastn", bioproject = "PRJNA1093008" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 15,406 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1093008 · 15,406 ✖

analysis 1

  • blastn · 15,406 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
198363 198363 PRJNA1093008_S_NODE_100201_length_227_cov_3.142857_g99874_i0 PRJNA1093008 100201 227 3.142857 7.13428539 Orcinus orca 9733 Chordata Chordata 176 1.15e-39   NTclustered gi|2280724236|ref|XR_004481104.2| 9733 g99874 i0 92 56.8766519823789 125 10 55 0 83 207 4413 4537 PREDICTED: Orcinus orca hyaluronidase-like (LOC117199770), transcript variant X4, misc_RNA blastn 12911 176 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Orcinus Orcinus orca
198364 198364 PRJNA1093008_S_NODE_100221_length_227_cov_2.967532_g99894_i0 PRJNA1093008 100221 227 2.967532 6.73629764 Bos taurus 9913 Chordata Chordata 403 4.85e-108   NTclustered gi|2587630320|ref|XM_059892323.1| 9913 g99894 i0 98.678 133.431718061674 227 3 100 0 1 227 6918 7144 PREDICTED: Bos taurus collagen type IV alpha 2 chain (COL4A2), transcript variant X2, mRNA blastn 30289 403 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
198365 198365 PRJNA1093008_S_NODE_100281_length_227_cov_2.500000_g99954_i0 PRJNA1093008 100281 227 2.5 5.675 Bos taurus 9913 Chordata Chordata 292 1.0899999999999999e-74   NTclustered gi|226510602|gb|AC150482.4| 9913 g99954 i0 89.868 118.995594713656 227 23 100 0 1 227 112342 112568 Bos taurus BAC CH240-308E11 (Children's Hospital Oakland Research Institute Bovine BAC Library complete sequence blastn 27012 292 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
198366 198366 PRJNA1093008_S_NODE_100361_length_227_cov_2.110390_g100034_i0 PRJNA1093008 100361 227 2.11039 4.7905853 Bos taurus 9913 Chordata Chordata 171 5.35e-38   NTclustered gi|528079616|gb|JX848345.1| 9913 g100034 i0 90.698 87.7929515418502 129 11 57 1 57 185 338625 338752 Bos taurus LILR1 (LILR1) and LILR2 (LILR2) genes, complete cds; LILR3 pseudogene, complete sequence; KIR region genomic sequence; FCAR (FCAR) and NCR1 (NCR1) genes, complete cds blastn 19929 171 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
198367 198367 PRJNA1093008_S_NODE_100461_length_226_cov_3.326797_g100134_i0 PRJNA1093008 100461 226 3.326797 7.51856122 Ovis canadensis 37174 Chordata Chordata 195 3.16e-45   NTclustered gi|2841469977|ref|XR_011251849.1| 37174 g100134 i0 85.052 102.393805309735 194 25 85 4 10 202 1542 1732 PREDICTED: Ovis canadensis uncharacterized lncRNA (LOC138426963), ncRNA blastn 23141 195 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis canadensis
198368 198368 PRJNA1093008_S_NODE_100541_length_226_cov_2.581699_g100214_i0 PRJNA1093008 100541 226 2.581699 5.83463974 Bos taurus 9913 Chordata Chordata 377 2.92e-100   NTclustered gi|2587664207|ref|XR_001494951.3| 9913 g100214 i0 99.048 41.4646017699115 210 2 93 0 17 226 4984 4775 PREDICTED: Bos taurus uncharacterized lncRNA (LOC101904396), transcript variant X1, ncRNA blastn 9371 377 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
198369 198369 PRJNA1093008_S_NODE_100661_length_226_cov_2.111111_g100334_i0 PRJNA1093008 100661 226 2.111111 4.77111086 Ovis aries 9940 Chordata Chordata 291 3.92e-74   NTclustered gi|2607083803|ref|XR_009598344.1| 9940 g100334 i0 90.265 1 226 16 99 5 1 225 2871 2651 PREDICTED: Ovis aries uncharacterized LOC132658544 (LOC132658544), ncRNA blastn 226 291 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
198370 198370 PRJNA1093008_S_NODE_100721_length_226_cov_2.013072_g100394_i0 PRJNA1093008 100721 226 2.013072 4.54954272 Bos indicus 9915 Chordata Chordata 148 2.49e-31   NTclustered gi|2878373007|ref|XM_019970936.2| 9915 g100394 i0 88.095 60.9115044247788 126 14 56 1 40 165 3707 3831 PREDICTED: Bos indicus TruB pseudouridine synthase family member 2 (TRUB2), mRNA blastn 13766 148 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
198371 198371 PRJNA1093008_S_NODE_100741_length_226_cov_2.013072_g100414_i0 PRJNA1093008 100741 226 2.013072 4.54954272 Bubalus kerabau 3119969 Chordata Chordata 305 1.4e-78   NTclustered gi|2496400839|ref|XM_055536367.1| 3119969 g100414 i0 92.13 0.955752212389381 216 17 96 0 9 224 1200 985 PREDICTED: Bubalus kerabau olfactory receptor 4F3/4F16/4F29-like (LOC129620552), mRNA blastn 216 305 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bubalus Bubalus kerabau
198372 198372 PRJNA1093008_S_NODE_101021_length_220_cov_4.938776_g100694_i0 PRJNA1093008 101021 220 4.938776 10.8653072 Bos taurus 9913 Chordata Chordata 183 6.62e-42   NTclustered gi|361050309|dbj|AP009249.1| 9913 g100694 i0 95.614 307.209090909091 114 5 52 0 107 220 103905 103792 Bos taurus genomic DNA, chromosome 13, BAC clone: HW-1511E03, complete sequence blastn 67586 183 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
198373 198373 PRJNA1093008_S_NODE_101601_length_208_cov_4.385185_g101274_i0 PRJNA1093008 101601 208 4.385185 9.1211848 Bos taurus 9913 Chordata Chordata 93.5 1.07e-14   NTclustered gi|445065088|emb|FO538764.1| 9913 g101274 i0 91.176 5.25 68 6 33 0 1 68 42089 42022 B.taurus DNA sequence from clone CH240-127A16, complete sequence blastn 1092 93.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
198374 198374 PRJNA1093008_S_NODE_101661_length_207_cov_4.022388_g101334_i0 PRJNA1093008 101661 207 4.022388 8.32634316 Bos taurus 9913 Chordata Chordata 215 2.18e-51   NTclustered gi|1068294018|gb|KX592814.1| 9913 g101334 i0 85.308 849.386473429952 211 27 100 4 1 207 3009466 3009676 Bos taurus isolate Dominette_000065F genomic sequence blastn 175823 215 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
198375 198375 PRJNA1093008_S_NODE_101921_length_202_cov_4.503876_g101594_i0 PRJNA1093008 101921 202 4.503876 9.09782952 Dama dama 30532 Chordata Chordata 291 3.42e-74   NTclustered gi|2625382668|ref|XR_009694242.1| 30532 g101594 i0 92.574 436.49504950495 202 15 100 0 1 202 1119 918 PREDICTED: Dama dama uncharacterized LOC133062710 (LOC133062710), ncRNA blastn 88172 291 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Dama Dama dama
198376 198376 PRJNA1093008_S_NODE_10261_length_441_cov_1.459239_g9935_i0 PRJNA1093008 10261 441 1.459239 6.43524399 Sousa chinensis 103600 Chordata Chordata 82.4 5.44e-11   NTclustered gi|1834471056|gb|MK766849.1| 103600 g9935 i0 83.333 11.9274376417234 90 14 20 1 141 229 218 307 Sousa chinensis microsatellite Sch974 sequence blastn 5260 82.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Sousa Sousa chinensis
198377 198377 PRJNA1093008_S_NODE_10341_length_440_cov_2.179837_g10015_i0 PRJNA1093008 10341 440 2.179837 9.5912828 Bos taurus 9913 Chordata Chordata 580 4.3899999999999984e-161   NTclustered gi|21425595|emb|AJ421481.1| 9913 g10015 i0 93.59 890.986363636364 390 23 90 2 27 416 72662 73049 Bos taurus X-inactivation center region, Jpx and Xist genes blastn 392034 580 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
198379 198379 PRJNA1093008_S_NODE_10781_length_435_cov_2.571823_g10455_i0 PRJNA1093008 10781 435 2.571823 11.18743005 Bos indicus 9915 Chordata Chordata 278 6.37e-70   NTclustered gi|2878464658|ref|XR_011562979.1| 9915 g10455 i0 94.444 159.505747126437 180 10 42 0 1 180 7033 7212 PREDICTED: Bos indicus uncharacterized lncRNA (LOC139178596), ncRNA blastn 69385 278 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
198380 198380 PRJNA1093008_S_NODE_11121_length_432_cov_1.072423_g10795_i0 PRJNA1093008 11121 432 1.072423 4.63286736 Bos taurus 9913 Chordata Chordata 754 0   NTclustered gi|1068294018|gb|KX592814.1| 9913 g10795 i0 100 1.07407407407407 408 0 94 0 25 432 9522960 9523367 Bos taurus isolate Dominette_000065F genomic sequence blastn 464 754 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
198382 198382 PRJNA1093008_S_NODE_11801_length_425_cov_8.250000_g11475_i0 PRJNA1093008 11801 425 8.25 35.0625 Pseudorca crassidens 82174 Chordata Chordata 182 5.01e-41   NTclustered gi|1481050975|dbj|AB989434.1| 82174 g11475 i0 77.059 53.6894117647059 340 62 79 11 1 335 973514 973186 Pseudorca crassidens genes for major histocompatibility complex extended class I, class I and class III sub-region, complete cds blastn 22818 182 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Pseudorca Pseudorca crassidens
198383 198383 PRJNA1093008_S_NODE_11961_length_424_cov_2.820513_g11635_i0 PRJNA1093008 11961 424 2.820513 11.95897512 Orcinus orca 9733 Chordata Chordata 254 1.04e-62   NTclustered gi|2280654637|ref|XM_004281438.3| 9733 g11635 i0 78.125 83.7028301886792 448 64 99 12 1 423 10775 10337 PREDICTED: Orcinus orca transmembrane protein 116 (TMEM116), transcript variant X4, mRNA blastn 35490 254 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Orcinus Orcinus orca
198384 198384 PRJNA1093008_S_NODE_12581_length_418_cov_61.724638_g12255_i0 PRJNA1093008 12581 418 61.724638 258.00898684 Bos javanicus 9906 Chordata Chordata 704 0   NTclustered gi|2633679211|ref|XR_009735241.1| 9906 g12255 i0 98.982 140.076555023923 393 4 94 0 1 393 459 67 PREDICTED: Bos javanicus uncharacterized LOC133243985 (LOC133243985), ncRNA blastn 58552 704 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
198386 198386 PRJNA1093008_S_NODE_13461_length_412_cov_0.908555_g13135_i0 PRJNA1093008 13461 412 0.908555 3.7432466 Equus asinus 9793 Chordata Chordata 56.5 0.003   NTclustered gi|2871616365|ref|XM_044773991.2| 9793 g13135 i0 100 0.550970873786408 30 0 7 0 195 224 1690 1719 PREDICTED: Equus asinus lin-52 DREAM MuvB core complex component (LIN52), transcript variant X3, mRNA blastn 227 56.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Perissodactyla Equidae Equus Equus asinus
198387 198387 PRJNA1093008_S_NODE_13541_length_411_cov_2.866864_g13215_i0 PRJNA1093008 13541 411 2.866864 11.78281104 Bos indicus 9915 Chordata Chordata 760 0   NTclustered gi|2878548518|ref|XM_070795579.1| 9915 g13215 i0 100 5.01216545012165 411 0 100 0 1 411 89017 88607 PREDICTED: Bos indicus uncharacterized protein (LOC139184810), transcript variant X2, mRNA blastn 2060 760 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
198388 198388 PRJNA1093008_S_NODE_13721_length_410_cov_2.041543_g13395_i0 PRJNA1093008 13721 410 2.041543 8.3703263 Bubalus bubalis 89462 Chordata Chordata 579 1.4599999999999995e-160   NTclustered gi|2128228028|ref|XR_006545247.1| 89462 g13395 i0 95.135 1.95853658536585 370 12 89 4 21 385 645 1013 PREDICTED: Bubalus bubalis uncharacterized LOC123329713 (LOC123329713), ncRNA blastn 803 579 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bubalus Bubalus bubalis
198390 198390 PRJNA1093008_S_NODE_13961_length_408_cov_2.567164_g13635_i0 PRJNA1093008 13961 408 2.567164 10.47402912 Ovis aries 9940 Chordata Chordata 248 4.6499999999999994e-61   NTclustered gi|2607073283|ref|XM_042238204.2| 9940 g13635 i0 88.462 365.448529411765 208 20 50 3 1 206 7499 7294 PREDICTED: Ovis aries sorting nexin 19 (SNX19), transcript variant X3, mRNA blastn 149103 248 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
198391 198391 PRJNA1093008_S_NODE_14061_length_407_cov_3.919162_g13735_i0 PRJNA1093008 14061 407 3.919162 15.95098934 Bos taurus 9913 Chordata Chordata 191 7.93e-44   NTclustered gi|1068294018|gb|KX592814.1| 9913 g13735 i0 90.411 55.3857493857494 146 12 37 2 248 392 4414297 4414441 Bos taurus isolate Dominette_000065F genomic sequence blastn 22542 191 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
198392 198392 PRJNA1093008_S_NODE_14141_length_407_cov_1.239521_g13815_i0 PRJNA1093008 14141 407 1.239521 5.04485047 Bos mutus 72004 Chordata Chordata 99 4.95e-16   NTclustered gi|2868777802|ref|XR_011462375.1| 72004 g13815 i0 92.647 15.977886977887 68 5 17 0 1 68 657 724 PREDICTED: Bos mutus uncharacterized lncRNA (LOC138985109), transcript variant X2, ncRNA blastn 6503 99 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos mutus
198393 198393 PRJNA1093008_S_NODE_14241_length_406_cov_1.849850_g13915_i0 PRJNA1093008 14241 406 1.84985 7.510391 Ovis canadensis 37174 Chordata Chordata 182 4.76e-41   NTclustered gi|2841353627|ref|XM_069593900.1| 37174 g13915 i0 92.857 6.22906403940887 126 7 31 1 283 406 1 126 PREDICTED: Ovis canadensis leptin receptor (LEPR), transcript variant X3, mRNA blastn 2529 182 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis canadensis
198394 198394 PRJNA1093008_S_NODE_14501_length_404_cov_1.628399_g14175_i0 PRJNA1093008 14501 404 1.628399 6.57873196 Dama dama 30532 Chordata Chordata 483 1.16e-131   NTclustered gi|2625291180|ref|XR_009696354.1| 30532 g14175 i0 91.884 1188.86386138614 345 28 85 0 36 380 633 289 PREDICTED: Dama dama uncharacterized LOC133071106 (LOC133071106), ncRNA blastn 480301 483 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Dama Dama dama
198395 198395 PRJNA1093008_S_NODE_14601_length_403_cov_2.669697_g14275_i0 PRJNA1093008 14601 403 2.669697 10.75887891 Bos mutus 72004 Chordata Chordata 82.4 4.93e-11   NTclustered gi|2868727115|ref|XM_070382886.1| 72004 g14275 i0 86.486 10.272952853598 74 10 18 0 327 400 7805 7878 PREDICTED: Bos mutus solute carrier family 10 member 5 (SLC10A5), mRNA blastn 4140 82.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos mutus
198396 198396 PRJNA1093008_S_NODE_14621_length_403_cov_2.342424_g14295_i0 PRJNA1093008 14621 403 2.342424 9.43996872 Bos javanicus 9906 Chordata Chordata 274 7.58e-69   NTclustered gi|2633756945|ref|XM_061387662.1| 9906 g14295 i0 91.584 387.277915632754 202 12 75 5 182 381 4153 3955 PREDICTED: Bos javanicus nuclear factor of activated T cells 3 (NFATC3), transcript variant X1, mRNA blastn 156073 274 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
198398 198398 PRJNA1093008_S_NODE_14941_length_401_cov_2.536585_g14615_i0 PRJNA1093008 14941 401 2.536585 10.17170585 Oryx dammah 59534 Chordata Chordata 564 3.99e-156   NTclustered gi|2009506189|ref|XM_040255882.1| 59534 g14615 i0 92.079 53.2069825436409 404 26 100 5 1 401 324 724 PREDICTED: Oryx dammah ADAM metallopeptidase with thrombospondin type 1 motif 15 (ADAMTS15), mRNA blastn 21336 564 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Oryx Oryx dammah
198399 198399 PRJNA1093008_S_NODE_14981_length_401_cov_1.503049_g14655_i0 PRJNA1093008 14981 401 1.503049 6.02722649 Bos indicus 9915 Chordata Chordata 58.4 8.26e-4   NTclustered gi|2878476710|ref|XR_011563446.1| 9915 g14655 i0 92.5 0.0997506234413965 40 3 10 0 342 381 18476 18437 PREDICTED: Bos indicus uncharacterized lncRNA (LOC139179010), ncRNA blastn 40 58.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
198401 198401 PRJNA1093008_S_NODE_15101_length_400_cov_2.296636_g14775_i0 PRJNA1093008 15101 400 2.296636 9.186544 Bos indicus 9915 Chordata Chordata 108 8.06e-19   NTclustered gi|2878400641|ref|XM_070804006.1| 9915 g14775 i0 80.851 5.28 141 23 35 3 256 394 11467 11329 PREDICTED: Bos indicus glutamine and serine rich 1 (QSER1), transcript variant X2, mRNA blastn 2112 108 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
198402 198402 PRJNA1093008_S_NODE_15121_length_400_cov_1.883792_g14795_i0 PRJNA1093008 15121 400 1.883792 7.535168 Pseudorca crassidens 82174 Chordata Chordata 128 6.19e-25   NTclustered gi|2791897185|ref|XR_010941079.1| 82174 g14795 i0 91.489 23.7925 94 7 23 1 295 387 569 662 PREDICTED: Pseudorca crassidens uncharacterized lncRNA (LOC137219357), transcript variant X3, ncRNA blastn 9517 128 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Pseudorca Pseudorca crassidens
198403 198403 PRJNA1093008_S_NODE_15201_length_399_cov_4.395706_g14875_i0 PRJNA1093008 15201 399 4.395706 17.53886694 Bos taurus 9913 Chordata Chordata 737 0   NTclustered gi|294979248|gb|AC237561.6| 9913 g14875 i0 100 136 399 0 100 0 1 399 4996 5394 Bos taurus Y Chr BAC BTDAEX-38H9 (Amplicon Express Bovine BAC Library (male)) complete sequence blastn 54264 737 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
198404 198404 PRJNA1093008_S_NODE_15221_length_399_cov_3.588957_g14895_i0 PRJNA1093008 15221 399 3.588957 14.31993843 Moschus berezovskii 68408 Chordata Chordata 357 7.229999999999997e-94   NTclustered gi|2492301282|ref|XR_008684677.1| 68408 g14895 i0 86.544 177.87969924812 327 41 82 2 2 328 3099 3422 PREDICTED: Moschus berezovskii uncharacterized LOC129549767 (LOC129549767), transcript variant X4, ncRNA blastn 70974 357 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Moschidae Moschus Moschus berezovskii
198405 198405 PRJNA1093008_S_NODE_15541_length_397_cov_4.617284_g15215_i0 PRJNA1093008 15541 397 4.617284 18.33061748 Balaenoptera ricei 2746895 Chordata Chordata 237 9.780000000000001e-58   NTclustered gi|2586518108|ref|XR_009497464.1| 2746895 g15215 i0 81.911 88.3803526448363 293 41 72 9 1 284 883 594 PREDICTED: Balaenoptera ricei uncharacterized LOC132348413 (LOC132348413), ncRNA blastn 35087 237 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Balaenopteridae Balaenoptera Balaenoptera ricei
198406 198406 PRJNA1093008_S_NODE_15781_length_396_cov_2.541796_g15455_i0 PRJNA1093008 15781 396 2.541796 10.06551216 Bos taurus 9913 Chordata Chordata 678 0   NTclustered gi|326380913|emb|FQ482114.7| 9913 g15455 i0 99.464 1.92424242424242 373 2 94 0 1 373 43716 43344 B.taurus DNA sequence from clone CH240-369N12, complete sequence blastn 762 678 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
198408 198408 PRJNA1093008_S_NODE_15961_length_395_cov_2.291925_g15635_i0 PRJNA1093008 15961 395 2.291925 9.05310375 Bos indicus 9915 Chordata Chordata 226 2.1e-54   NTclustered gi|2878542212|ref|XR_011567758.1| 9915 g15635 i0 86.893 53.1392405063291 206 22 51 4 103 304 4903 5107 PREDICTED: Bos indicus uncharacterized lncRNA (LOC139184202), transcript variant X4, ncRNA blastn 20990 226 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
198409 198409 PRJNA1093008_S_NODE_16141_length_394_cov_2.498442_g15815_i0 PRJNA1093008 16141 394 2.498442 9.84386148 Odocoileus virginianus 9874 Chordata Chordata 62.1 6.26e-5   NTclustered gi|2871700160|ref|XM_070456651.1| 9874 g15815 i0 95 8.32741116751269 40 0 10 1 303 342 2101 2138 PREDICTED: Odocoileus virginianus HLA class II histocompatibility antigen, DO alpha chain (LOC110146965), transcript variant X2, mRNA blastn 3281 62.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Odocoileus Odocoileus virginianus
198410 198410 PRJNA1093008_S_NODE_16281_length_393_cov_3.106250_g15955_i0 PRJNA1093008 16281 393 3.10625 12.2075625 Bison bison 9901 Chordata Chordata 708 0   NTclustered gi|742169551|ref|XM_010851312.1| 43346 g15955 i0 99.235 0.997455470737914 392 3 99 0 1 392 4626 4235 PREDICTED: Bison bison bison kinesin light chain 1 (KLC1), transcript variant X1, mRNA blastn 392 708 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bison Bison bison
198411 198411 PRJNA1093008_S_NODE_16341_length_393_cov_1.925000_g16015_i0 PRJNA1093008 16341 393 1.925 7.56525 Odocoileus virginianus 9874 Chordata Chordata 424 6.91e-114   NTclustered gi|2871684062|ref|XR_011482247.1| 9874 g16015 i0 86.842 5.01272264631043 380 48 96 2 2 380 4611 4989 PREDICTED: Odocoileus virginianus uncharacterized lncRNA (LOC139029928), transcript variant X1, ncRNA blastn 1970 424 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Odocoileus Odocoileus virginianus
198412 198412 PRJNA1093008_S_NODE_16541_length_392_cov_1.394984_g16215_i0 PRJNA1093008 16541 392 1.394984 5.46833728 Oryx dammah 59534 Chordata Chordata 427 5.33e-115   NTclustered gi|2009578691|ref|XM_040226796.1| 59534 g16215 i0 95.88 0.681122448979592 267 6 68 2 127 392 10 272 PREDICTED: Oryx dammah kelch domain containing 2 (KLHDC2), transcript variant X1, mRNA blastn 267 427 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Oryx Oryx dammah
198414 198414 PRJNA1093008_S_NODE_16661_length_391_cov_2.701258_g16335_i0 PRJNA1093008 16661 391 2.701258 10.56191878 Bubalus kerabau 3119969 Chordata Chordata 239 2.67e-58   NTclustered gi|2496460655|ref|XM_055560460.1| 3119969 g16335 i0 88.832 83.5319693094629 197 18 50 4 183 377 32560 32366 PREDICTED: Bubalus kerabau hypoxia inducible factor 1 subunit alpha inhibitor (HIF1AN), mRNA blastn 32661 239 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bubalus Bubalus kerabau
198415 198415 PRJNA1093008_S_NODE_16881_length_390_cov_1.835962_g16554_i0 PRJNA1093008 16881 390 1.835962 7.1602518 Bos mutus 72004 Chordata Chordata 261 5.69e-65   NTclustered gi|2868756793|ref|XM_005902634.2| 72004 g16554 i0 89.1 140.497435897436 211 21 54 2 175 383 7265 7055 PREDICTED: Bos mutus nucleotide binding oligomerization domain containing 2 (NOD2), transcript variant X2, mRNA blastn 54794 261 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos mutus
198416 198416 PRJNA1093008_S_NODE_16901_length_390_cov_1.611987_g16574_i0 PRJNA1093008 16901 390 1.611987 6.2867493 Bos javanicus 9906 Chordata Chordata 658 0   NTclustered gi|2633687082|ref|XR_009737362.1| 9906 g16574 i0 99.178 105.471794871795 365 3 94 0 26 390 1036 672 PREDICTED: Bos javanicus uncharacterized LOC133250609 (LOC133250609), ncRNA blastn 41134 658 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
198417 198417 PRJNA1093008_S_NODE_17601_length_386_cov_1.968051_g17274_i0 PRJNA1093008 17601 386 1.968051 7.59667686 Bubalus kerabau 3119969 Chordata Chordata 573 6.359999999999999e-159   NTclustered gi|2496518894|ref|XR_008708385.1| 3119969 g17274 i0 93.523 2 386 23 100 1 1 386 601 218 PREDICTED: Bubalus kerabau uncharacterized LOC129639403 (LOC129639403), transcript variant X3, ncRNA blastn 772 573 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bubalus Bubalus kerabau
198418 198418 PRJNA1093008_S_NODE_17801_length_385_cov_1.855769_g17474_i0 PRJNA1093008 17801 385 1.855769 7.14471065 Odocoileus virginianus 9874 Chordata Chordata 139 2.74e-28   NTclustered gi|2871637586|ref|XR_002314396.2| 9874 g17474 i0 91.262 114.111688311688 103 8 26 1 156 257 6269 6371 PREDICTED: Odocoileus virginianus uncharacterized lncRNA (LOC110139081), transcript variant X1, ncRNA blastn 43933 139 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Odocoileus Odocoileus virginianus
198420 198420 PRJNA1093008_S_NODE_17961_length_384_cov_2.228296_g17634_i0 PRJNA1093008 17961 384 2.228296 8.55665664 Bos taurus 9913 Chordata Chordata 257 7.23e-64   NTclustered gi|1941072806|gb|AC270079.2| 9913 g17634 i0 87.179 48.3880208333333 234 20 58 3 1 224 74572 74339 Bos taurus BAC CH240-352E13 from chromosome X, complete sequence blastn 18581 257 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
198421 198421 PRJNA1093008_S_NODE_17981_length_384_cov_1.977492_g17654_i0 PRJNA1093008 17981 384 1.977492 7.59356928 Pseudorca crassidens 82174 Chordata Chordata 235 3.3899999999999995e-57   NTclustered gi|2791901482|ref|XR_010941554.1| 82174 g17654 i0 79.822 69.5989583333333 337 56 87 11 25 357 3137 3465 PREDICTED: Pseudorca crassidens uncharacterized lncRNA (LOC137220207), ncRNA blastn 26726 235 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Pseudorca Pseudorca crassidens
198422 198422 PRJNA1093008_S_NODE_18021_length_384_cov_1.459807_g17694_i0 PRJNA1093008 18021 384 1.459807 5.60565888 Eschrichtius robustus 9764 Chordata Chordata 159 2.1e-34   NTclustered gi|2806541927|ref|XM_068560411.1| 9764 g17694 i0 84.472 34.0052083333333 161 25 42 0 163 323 1878 2038 PREDICTED: Eschrichtius robustus apolipoprotein B mRNA editing enzyme catalytic subunit 1 (APOBEC1), mRNA blastn 13058 159 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Eschrichtiidae Eschrichtius Eschrichtius robustus
198423 198423 PRJNA1093008_S_NODE_18161_length_383_cov_2.235484_g17834_i0 PRJNA1093008 18161 383 2.235484 8.56190372 Sagmatias obliquidens 3371155 Chordata Chordata 333 1.17e-86   NTclustered gi|1516080513|ref|XR_003428138.1| 3371155 g17834 i0 83.967 1.92167101827676 368 38 93 12 2 356 929 1288 PREDICTED: Sagmatias obliquidens uncharacterized lncRNA (LOC113607907), ncRNA blastn 736 333 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Sagmatias Sagmatias obliquidens
198425 198425 PRJNA1093008_S_NODE_18921_length_379_cov_2.500000_g18594_i0 PRJNA1093008 18921 379 2.5 9.475 Bos taurus 9913 Chordata Chordata 682 0   NTclustered gi|31343615|ref|NM_175827.2| 9913 g18594 i0 99.732 21.6411609498681 373 0 98 1 7 379 736 365 Bos taurus C-C motif chemokine ligand 5 (CCL5), mRNA blastn 8202 682 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
198426 198426 PRJNA1093008_S_NODE_18941_length_379_cov_2.251634_g18614_i0 PRJNA1093008 18941 379 2.251634 8.53369286 Bubalus kerabau 3119969 Chordata Chordata 313 1.5e-80   NTclustered gi|2496512584|ref|XM_055534938.1| 3119969 g18614 i0 81.915 107.076517150396 376 62 98 5 7 379 7779 8151 PREDICTED: Bubalus kerabau KIAA0408 ortholog (KIAA0408), transcript variant X4, mRNA blastn 40582 313 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bubalus Bubalus kerabau
198427 198427 PRJNA1093008_S_NODE_18961_length_379_cov_1.967320_g18634_i0 PRJNA1093008 18961 379 1.96732 7.4561428 Bos taurus 9913 Chordata Chordata 303 9.03e-78   NTclustered gi|1068294018|gb|KX592814.1| 9913 g18634 i0 95.312 127.554089709763 192 7 56 2 80 271 11533475 11533286 Bos taurus isolate Dominette_000065F genomic sequence blastn 48343 303 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
198428 198428 PRJNA1093008_S_NODE_19181_length_378_cov_1.514754_g18854_i0 PRJNA1093008 19181 378 1.514754 5.72577012 Bos javanicus 9906 Chordata Chordata 309 1.94e-79   NTclustered gi|2633841490|ref|XM_061411344.1| 9906 g18854 i0 88.148 143.39417989418 270 19 68 8 1 257 2848 2579 PREDICTED: Bos javanicus guanylate-binding protein 4-like (LOC133244318), mRNA blastn 54203 309 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
198429 198429 PRJNA1093008_S_NODE_19381_length_377_cov_1.565789_g19054_i0 PRJNA1093008 19381 377 1.565789 5.90302453 Dama dama 30532 Chordata Chordata 580 3.7e-161   NTclustered gi|2625351903|ref|XR_009691757.1| 30532 g19054 i0 94.459 17.9283819628647 379 18 100 2 1 377 7217 7594 PREDICTED: Dama dama uncharacterized LOC133051041 (LOC133051041), ncRNA blastn 6759 580 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Dama Dama dama
198430 198430 PRJNA1093008_S_NODE_19521_length_376_cov_2.521452_g19194_i0 PRJNA1093008 19521 376 2.521452 9.48065952 Bubalus kerabau 3119969 Chordata Chordata 159 2.0499999999999998e-34   NTclustered gi|2496430999|ref|XR_008703444.1| 3119969 g19194 i0 79.583 1.92553191489362 240 35 60 9 150 376 1338 1100 PREDICTED: Bubalus kerabau uncharacterized LOC129629981 (LOC129629981), ncRNA blastn 724 159 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bubalus Bubalus kerabau
198431 198431 PRJNA1093008_S_NODE_19801_length_375_cov_1.523179_g19474_i0 PRJNA1093008 19801 375 1.523179 5.71192125 Ovis aries 9940 Chordata Chordata 555 2.2299999999999994e-153   NTclustered gi|1596078049|gb|MH680527.1| 9940 g19474 i0 93.548 165.930666666667 372 24 100 0 1 372 209053 209424 Ovis aries breed Texel KIR region genomic sequence blastn 62224 555 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
198432 198432 PRJNA1093008_S_NODE_20381_length_372_cov_2.658863_g20054_i0 PRJNA1093008 20381 372 2.658863 9.89097036 Bos javanicus 9906 Chordata Chordata 117 1.24e-21   NTclustered gi|2633865717|ref|XM_061417187.1| 9906 g20054 i0 98.485 20.2069892473118 66 1 18 0 29 94 4779 4714 PREDICTED: Bos javanicus chromosome 5 C12orf75 homolog (C5H12orf75), transcript variant X14, mRNA blastn 7517 117 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
198433 198433 PRJNA1093008_S_NODE_20461_length_372_cov_1.545151_g20134_i0 PRJNA1093008 20461 372 1.545151 5.74796172 Equus caballus 9796 Chordata Chordata 174 7.24e-39   NTclustered gi|2868043008|ref|XR_011431910.1| 9796 g20134 i0 77.597 8.27956989247312 308 55 80 10 9 305 2656 2352 PREDICTED: Equus caballus uncharacterized lncRNA (LOC138920540), transcript variant X4, ncRNA blastn 3080 174 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Perissodactyla Equidae Equus Equus caballus
198434 198434 PRJNA1093008_S_NODE_20501_length_372_cov_1.030100_g20174_i0 PRJNA1093008 20501 372 1.0301 3.831972 Bos indicus 9915 Chordata Chordata 106 2.68e-18   NTclustered gi|2878556693|ref|XM_019956232.2| 9915 g20174 i0 92 16.8629032258065 75 6 20 0 298 372 11811 11737 PREDICTED: Bos indicus NHS actin remodeling regulator (NHS), transcript variant X3, mRNA blastn 6273 106 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
198435 198435 PRJNA1093008_S_NODE_20881_length_370_cov_1.814815_g20554_i0 PRJNA1093008 20881 370 1.814815 6.7148155 Bos mutus 72004 Chordata Chordata 651 0   NTclustered gi|2868775289|ref|XR_011467481.1| 72004 g20554 i0 98.378 2 370 6 100 0 1 370 1874 1505 PREDICTED: Bos mutus uncharacterized lncRNA (LOC138991502), transcript variant X1, ncRNA blastn 740 651 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos mutus
198436 198436 PRJNA1093008_S_NODE_21041_length_369_cov_3.033784_g20714_i0 PRJNA1093008 21041 369 3.033784 11.19466296 Odocoileus virginianus 9874 Chordata Chordata 241 6.97e-59   NTclustered gi|2871636804|ref|XM_070462615.1| 9874 g20714 i0 88.557 112.10298102981 201 19 54 4 41 238 3588 3389 PREDICTED: Odocoileus virginianus FA complementation group B (FANCB), transcript variant X2, mRNA blastn 41366 241 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Odocoileus Odocoileus virginianus
198437 198437 PRJNA1093008_S_NODE_21301_length_368_cov_2.535593_g20974_i0 PRJNA1093008 21301 368 2.535593 9.33098224 Bos taurus 9913 Chordata Chordata 305 2.43e-78   NTclustered gi|1068294018|gb|KX592814.1| 9913 g20974 i0 83.041 992.584239130435 342 52 97 5 1 337 11118631 11118291 Bos taurus isolate Dominette_000065F genomic sequence blastn 365271 305 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
198438 198438 PRJNA1093008_S_NODE_21501_length_367_cov_3.295918_g21174_i0 PRJNA1093008 21501 367 3.295918 12.09601906 Orcinus orca 9733 Chordata Chordata 274 6.829999999999998e-69   NTclustered gi|2280642138|ref|XM_049695633.1| 9733 g21174 i0 87.712 1.28610354223433 236 27 64 2 104 339 6804 6571 PREDICTED: Orcinus orca glutamate ionotropic receptor kainate type subunit 2 (GRIK2), transcript variant X2, mRNA blastn 472 274 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Orcinus Orcinus orca
198439 198439 PRJNA1093008_S_NODE_22081_length_365_cov_1.845890_g21754_i0 PRJNA1093008 22081 365 1.84589 6.7374985 Mesoplodon densirostris 48708 Chordata Chordata 255 2.46e-63   NTclustered gi|2589168498|ref|XM_060108695.1| 48708 g21754 i0 90.674 5.42739726027397 193 16 52 2 10 200 3850 3658 PREDICTED: Mesoplodon densirostris cyclin dependent kinase 1 (CDK1), transcript variant X1, mRNA blastn 1981 255 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Ziphiidae Mesoplodon Mesoplodon densirostris
198440 198440 PRJNA1093008_S_NODE_22401_length_364_cov_1.302405_g22074_i0 PRJNA1093008 22401 364 1.302405 4.7407542 Bos taurus 9913 Chordata Chordata 200 1.1699999999999999e-46   NTclustered gi|226424005|gb|AC150653.7| 9913 g22074 i0 97.458 39.3626373626374 118 2 32 1 41 158 152736 152852 Bos taurus BAC CH240-226L9 (Children's Hospital Oakland Research Institute Bovine BAC Library complete sequence blastn 14328 200 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
198441 198441 PRJNA1093008_S_NODE_22801_length_362_cov_2.131488_g22474_i0 PRJNA1093008 22801 362 2.131488 7.71598656 Bos javanicus 9906 Chordata Chordata 191 6.97e-44   NTclustered gi|2633900908|ref|XM_061426255.1| 9906 g22474 i0 90 46.1187845303867 150 12 41 3 124 270 9778 9927 PREDICTED: Bos javanicus spermatogenesis-associated protein 31E1-like (LOC133253055), transcript variant X2, mRNA blastn 16695 191 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
198442 198442 PRJNA1093008_S_NODE_23121_length_361_cov_1.295139_g22794_i0 PRJNA1093008 23121 361 1.295139 4.67545179 Ovis canadensis 37174 Chordata Chordata 246 1.46e-60   NTclustered gi|2841480677|ref|XM_069571180.1| 37174 g22794 i0 88.35 31.7091412742382 206 23 57 1 134 338 346 551 PREDICTED: Ovis canadensis cytochrome P450 3A24 (LOC138429538), transcript variant X1, mRNA blastn 11447 246 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis canadensis
198443 198443 PRJNA1093008_S_NODE_23341_length_360_cov_1.832753_g23014_i0 PRJNA1093008 23341 360 1.832753 6.5979108 Ovis aries 9940 Chordata Chordata 483 1.02e-131   NTclustered gi|2607028060|ref|XM_060398593.1| 9940 g23014 i0 90.786 4.575 369 22 99 2 3 359 21188 21556 PREDICTED: Ovis aries signal induced proliferation associated 1 like 3 (SIPA1L3), transcript variant X5, mRNA blastn 1647 483 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
198444 198444 PRJNA1093008_S_NODE_23581_length_359_cov_1.580420_g23254_i0 PRJNA1093008 23581 359 1.58042 5.6737078 Bos javanicus 9906 Chordata Chordata 220 8.81e-53   NTclustered gi|2633780543|ref|XM_061382228.1| 9906 g23254 i0 89.326 87.4846796657382 178 15 49 3 80 255 4362 4187 PREDICTED: Bos javanicus inducible T cell costimulator (ICOS), mRNA blastn 31407 220 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
198446 198446 PRJNA1093008_S_NODE_24341_length_356_cov_2.176678_g24014_i0 PRJNA1093008 24341 356 2.176678 7.74897368 Ovis aries 9940 Chordata Chordata 174 6.89e-39   NTclustered gi|2607098089|ref|XR_009598660.1| 9940 g24014 i0 97.087 42.8932584269663 103 3 29 0 1 103 18862 18964 PREDICTED: Ovis aries uncharacterized LOC106990546 (LOC106990546), transcript variant X1, ncRNA blastn 15270 174 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
198447 198447 PRJNA1093008_S_NODE_24461_length_356_cov_1.088339_g24134_i0 PRJNA1093008 24461 356 1.088339 3.87448684 Bos taurus 9913 Chordata Chordata 182 4.12e-41   NTclustered gi|2587918737|tpg|BK064707.1| 9913 g24134 i0 90 109.168539325843 140 14 74 0 29 168 1905389 1905250 TPA: Bos taurus breed Hereford TRA/TRD locus blastn 38864 182 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
198448 198448 PRJNA1093008_S_NODE_24661_length_355_cov_1.677305_g24334_i0 PRJNA1093008 24661 355 1.677305 5.95443275 Bos taurus 9913 Chordata Chordata 462 1.31e-125   NTclustered gi|2587692790|ref|XM_059888856.1| 9913 g24334 i0 99.222 1.4112676056338 257 1 72 1 1 256 53 309 PREDICTED: Bos taurus uncharacterized protein (LOC112447312), mRNA blastn 501 462 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
198449 198449 PRJNA1093008_S_NODE_24721_length_355_cov_1.092199_g24394_i0 PRJNA1093008 24721 355 1.092199 3.87730645 Bos javanicus 9906 Chordata Chordata 211 5.24e-50   NTclustered gi|2633806866|ref|XR_009733093.1| 9906 g24394 i0 79.118 9.74647887323944 340 46 90 15 1 318 489 825 PREDICTED: Bos javanicus high mobility group nucleosomal binding domain 4 (HMGN4), transcript variant X2, misc_RNA blastn 3460 211 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
198450 198450 PRJNA1093008_S_NODE_25101_length_353_cov_3.021429_g24774_i0 PRJNA1093008 25101 353 3.021429 10.66564437 Bos javanicus 9906 Chordata Chordata 636 7.239999999999998e-178   NTclustered gi|2633915628|ref|XR_009735026.1| 9906 g24774 i0 99.153 2.71671388101983 354 2 100 1 1 353 1506 1859 PREDICTED: Bos javanicus uncharacterized LOC133243239 (LOC133243239), ncRNA blastn 959 636 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
198451 198451 PRJNA1093008_S_NODE_25161_length_353_cov_2.200000_g24834_i0 PRJNA1093008 25161 353 2.2 7.766 Bison bison 9901 Chordata Chordata 363 1.3599999999999999e-95   NTclustered gi|742156353|ref|XM_010847616.1| 43346 g24834 i0 96.774 71.1019830028329 217 7 61 0 1 217 2577 2793 PREDICTED: Bison bison bison coagulation factor II (thrombin) receptor-like 1 (F2RL1), mRNA blastn 25099 363 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bison Bison bison
198453 198453 PRJNA1093008_S_NODE_25221_length_353_cov_1.671429_g24894_i0 PRJNA1093008 25221 353 1.671429 5.90014437 Bos javanicus 9906 Chordata Chordata 154 8.890000000000001e-33   NTclustered gi|2633884567|ref|XR_009737421.1| 9906 g24894 i0 85.256 60.300283286119 156 16 42 6 3 151 5419 5264 PREDICTED: Bos javanicus uncharacterized LOC133250791 (LOC133250791), ncRNA blastn 21286 154 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
198454 198454 PRJNA1093008_S_NODE_25241_length_353_cov_1.575000_g24914_i0 PRJNA1093008 25241 353 1.575 5.55975 Ovis aries 9940 Chordata Chordata 113 1.51e-20   NTclustered gi|2587918875|tpg|BK064708.1| 9940 g24914 i0 95.714 48.1926345609065 70 3 20 0 1 70 2281585 2281654 TPA: Ovis aries breed Rambouillet TRA/TRD locus blastn 17012 113 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
198455 198455 PRJNA1093008_S_NODE_25401_length_352_cov_2.996416_g25074_i0 PRJNA1093008 25401 352 2.996416 10.54738432 Globicephala melas 9731 Chordata Chordata 150 1.15e-31   NTclustered gi|2597741532|ref|XM_030841091.2| 9731 g25074 i0 82.065 46.8636363636364 184 26 50 6 1 177 5183 5366 PREDICTED: Globicephala melas protocadherin beta 5 (PCDHB5), mRNA blastn 16496 150 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Globicephala Globicephala melas
198456 198456 PRJNA1093008_S_NODE_25681_length_351_cov_2.913669_g25354_i0 PRJNA1093008 25681 351 2.913669 10.22697819 Bos indicus 9915 Chordata Chordata 348 3.78e-91   NTclustered gi|2878467424|ref|XM_070776784.1| 9915 g25354 i0 98.01 5.68091168091168 201 2 57 1 1 199 1833 1633 PREDICTED: Bos indicus chondroitin sulfate proteoglycan 5 (CSPG5), transcript variant X2, mRNA blastn 1994 348 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
198457 198457 PRJNA1093008_S_NODE_25701_length_351_cov_2.636691_g25374_i0 PRJNA1093008 25701 351 2.636691 9.25478541 Globicephala melas 9731 Chordata Chordata 202 3.11e-47   NTclustered gi|2597675314|ref|XM_030846348.2| 9731 g25374 i0 87.5 46.6780626780627 176 21 50 1 46 221 646 820 PREDICTED: Globicephala melas regulatory subunit of type II PKA R-subunit domain containing 1 (RIIAD1), transcript variant X1, mRNA blastn 16384 202 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Globicephala Globicephala melas
198459 198459 PRJNA1093008_S_NODE_25961_length_350_cov_2.830325_g25634_i0 PRJNA1093008 25961 350 2.830325 9.9061375 Cervus canadensis 1574408 Chordata Chordata 551 2.669999999999999e-152   NTclustered gi|2090139366|ref|XM_043489219.1| 1574408 g25634 i0 97.231 40.7742857142857 325 9 93 0 26 350 1809 1485 PREDICTED: Cervus canadensis iroquois homeobox 4 (IRX4), transcript variant X1, mRNA blastn 14271 551 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Cervus Cervus canadensis
198460 198460 PRJNA1093008_S_NODE_26021_length_350_cov_2.137184_g25694_i0 PRJNA1093008 26021 350 2.137184 7.480144 Odocoileus virginianus 9874 Chordata Chordata 128 5.34e-25   NTclustered gi|2871645892|ref|XR_011487960.1| 9874 g25694 i0 93.182 26.5285714285714 88 5 25 1 1 87 3687 3600 PREDICTED: Odocoileus virginianus uncharacterized lncRNA (LOC139035290), ncRNA blastn 9285 128 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Odocoileus Odocoileus virginianus
198461 198461 PRJNA1093008_S_NODE_26041_length_350_cov_2.007220_g25714_i0 PRJNA1093008 26041 350 2.00722 7.02527 Manis pentadactyla 143292 Chordata Chordata 58.4 7.11e-4   NTclustered gi|2522789763|ref|XR_008992396.1| 143292 g25714 i0 74.522 0.448571428571429 157 29 44 8 167 319 1288 1437 PREDICTED: Manis pentadactyla uncharacterized LOC118910802 (LOC118910802), transcript variant X2, ncRNA blastn 157 58.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Pholidota Manidae Manis Manis pentadactyla
198462 198462 PRJNA1093008_S_NODE_26361_length_349_cov_1.952899_g26034_i0 PRJNA1093008 26361 349 1.952899 6.81561751 Ovis aries 9940 Chordata Chordata 403 7.899999999999999e-108   NTclustered gi|2606981123|ref|XM_027973604.3| 9940 g26034 i0 88.855 59.3839541547278 332 31 93 2 24 349 6825 7156 PREDICTED: Ovis aries ganglioside induced differentiation associated protein 2 (GDAP2), transcript variant X1, mRNA blastn 20725 403 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
198463 198463 PRJNA1093008_S_NODE_26401_length_349_cov_1.673913_g26074_i0 PRJNA1093008 26401 349 1.673913 5.84195637 Kogia breviceps 27615 Chordata Chordata 202 3.09e-47   NTclustered gi|2782164626|ref|XM_059067523.2| 27615 g26074 i0 82.895 65.3438395415473 228 35 64 4 81 305 4637 4411 PREDICTED: Kogia breviceps ring finger protein 150 (RNF150), transcript variant X1, mRNA blastn 22805 202 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Physeteridae Kogia Kogia breviceps
198464 198464 PRJNA1093008_S_NODE_26661_length_348_cov_1.970909_g26334_i0 PRJNA1093008 26661 348 1.970909 6.85876332 Pseudorca crassidens 82174 Chordata Chordata 172 2.42e-38   NTclustered gi|2791911327|ref|XM_067730538.1| 82174 g26334 i0 80.247 1.11206896551724 243 37 69 8 78 316 20489 20254 PREDICTED: Pseudorca crassidens ciliogenesis and planar polarity effector complex subunit 1 (CPLANE1), transcript variant X9, mRNA blastn 387 172 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Pseudorca Pseudorca crassidens
198465 198465 PRJNA1093008_S_NODE_26741_length_348_cov_1.400000_g26414_i0 PRJNA1093008 26741 348 1.4 4.872 Sus scrofa 9823 Chordata Chordata 134 1.14e-26   NTclustered gi|301016705|emb|CU928871.10| 9823 g26414 i0 89.623 21.7787356321839 106 9 30 1 242 345 1280 1385 Pig DNA sequence from clone CH242-52A17 on chromosome X, complete sequence blastn 7579 134 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Suidae Sus Sus scrofa
198466 198466 PRJNA1093008_S_NODE_26941_length_347_cov_2.164234_g26614_i0 PRJNA1093008 26941 347 2.164234 7.50989198 Bos taurus 9913 Chordata Chordata 255 2.33e-63   NTclustered gi|2587632688|ref|XR_009496903.1| 9913 g26614 i0 88.679 2.14409221902017 212 21 61 2 3 212 4241 4451 PREDICTED: Bos taurus dihydrodiol dehydrogenase 3-like (LOC100335780), misc_RNA blastn 744 255 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
198467 198467 PRJNA1093008_S_NODE_2741_length_665_cov_3.437500_g2444_i0 PRJNA1093008 2741 665 3.4375 22.859375 Oryx dammah 59534 Chordata Chordata 174 1.35e-38   NTclustered gi|2009605944|ref|XR_005719514.1| 59534 g2444 i0 94.643 7.15037593984962 112 6 17 0 550 661 25 136 PREDICTED: Oryx dammah uncharacterized LOC120856916 (LOC120856916), ncRNA blastn 4755 174 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Oryx Oryx dammah
198468 198468 PRJNA1093008_S_NODE_27541_length_345_cov_2.378676_g27214_i0 PRJNA1093008 27541 345 2.378676 8.2064322 Crocuta crocuta 9678 Chordata Chordata 222 2.35e-53   NTclustered gi|10185664|gb|AF180496.1| 9678 g27214 i0 88.298 0.942028985507246 188 18 54 3 1 188 233 50 Crocuta crocuta microsatellite Ccr16 sequence blastn 325 222 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Hyaenidae Crocuta Crocuta crocuta
198469 198469 PRJNA1093008_S_NODE_27941_length_344_cov_1.634686_g27614_i0 PRJNA1093008 27941 344 1.634686 5.62331984 Bos indicus 9915 Chordata Chordata 104 8.86e-18   NTclustered gi|2878494013|ref|XR_011564307.1| 9915 g27614 i0 83.051 1.48837209302326 118 17 34 2 227 344 12393 12507 PREDICTED: Bos indicus uncharacterized lncRNA (LOC139179993), ncRNA blastn 512 104 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
198470 198470 PRJNA1093008_S_NODE_28101_length_343_cov_3.740741_g27774_i0 PRJNA1093008 28101 343 3.740741 12.83074163 Oryx dammah 59534 Chordata Chordata 540 5.68e-149   NTclustered gi|2009620683|ref|XM_040234218.1| 59534 g27774 i0 95.821 3.48104956268222 335 13 97 1 10 343 1619 1953 PREDICTED: Oryx dammah keratin, type II cuticular Hb1-like (LOC120858274), mRNA blastn 1194 540 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Oryx Oryx dammah
198471 198471 PRJNA1093008_S_NODE_28441_length_342_cov_3.836431_g28114_i0 PRJNA1093008 28441 342 3.836431 13.12059402 Odocoileus virginianus 9874 Chordata Chordata 152 3.0999999999999996e-32   NTclustered gi|2871713538|ref|XR_011484740.1| 9874 g28114 i0 89.831 32.1608187134503 118 12 35 0 4 121 2769 2652 PREDICTED: Odocoileus virginianus uncharacterized lncRNA (LOC139032215), ncRNA blastn 10999 152 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Odocoileus Odocoileus virginianus
198472 198472 PRJNA1093008_S_NODE_28481_length_342_cov_2.988848_g28154_i0 PRJNA1093008 28481 342 2.988848 10.22186016 Odocoileus virginianus 9874 Chordata Chordata 128 5.22e-25   NTclustered gi|2871682454|ref|XM_070450908.1| 9874 g28154 i0 85.6 26.0058479532164 125 15 37 2 159 283 4849 4728 PREDICTED: Odocoileus virginianus Ras and Rab interactor like (RINL), transcript variant X3, mRNA blastn 8894 128 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Odocoileus Odocoileus virginianus
198473 198473 PRJNA1093008_S_NODE_28641_length_342_cov_1.576208_g28314_i0 PRJNA1093008 28641 342 1.576208 5.39063136 Moschus berezovskii 68408 Chordata Chordata 99 4.09e-16   NTclustered gi|2492279333|ref|XM_055407675.1| 68408 g28314 i0 89.61 18.2865497076023 77 8 23 0 17 93 1968 1892 PREDICTED: Moschus berezovskii proline rich 15 like (PRR15L), mRNA blastn 6254 99 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Moschidae Moschus Moschus berezovskii
198474 198474 PRJNA1093008_S_NODE_28701_length_342_cov_1.171004_g28374_i0 PRJNA1093008 28701 342 1.171004 4.00483368 Bos taurus 9913 Chordata Chordata 518 2.65e-142   NTclustered gi|119216318|gb|AY644517.5| 9913 g28374 i0 94.362 176.207602339181 337 19 99 0 1 337 110185 109849 Bos taurus T cell receptor gamma cluster 1 (TCRG1) gene, complete sequence blastn 60263 518 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
198475 198475 PRJNA1093008_S_NODE_28921_length_341_cov_2.011194_g28594_i0 PRJNA1093008 28921 341 2.011194 6.85817154 Odocoileus virginianus 9874 Chordata Chordata 191 6.54e-44   NTclustered gi|2871640080|ref|XM_070463659.1| 9874 g28594 i0 86.364 110.310850439883 176 22 52 1 164 339 5160 4987 PREDICTED: Odocoileus virginianus PAS domain containing serine/threonine kinase (PASK), transcript variant X6, mRNA blastn 37616 191 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Odocoileus Odocoileus virginianus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;