RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1093008" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 6 ✖

bioproject 1

  • PRJNA1093008 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7396950 7396950 PRJNA1093008_S_NODE_93426_length_242_cov_482.952663_g93099_i0 PRJNA1093008 93426 242 482.952663 1168.74544446 root 1 Root_unresolved Root_unresolved 62.1 3.62e-5   NTclustered gi|1841985160|gb|MT277585.1| 10515 g93099 i0 94.872 14.4876033057851 39 2 16 0 180 218 31138 31100 Mutant Human adenovirus 2 isolate HAdV-C2-dE3B-CMV-GFP, complete sequence blastn 3506 62.1 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
8672420 8672420 PRJNA1093008_S_NODE_98467_length_233_cov_290.425000_g98140_i0 PRJNA1093008 98467 233 290.425 676.69025 root 1 Root_unresolved Root_unresolved 62.1 3.46e-5   NTclustered gi|1841985160|gb|MT277585.1| 10515 g98140 i0 94.872 15.0472103004292 39 2 17 0 25 63 31100 31138 Mutant Human adenovirus 2 isolate HAdV-C2-dE3B-CMV-GFP, complete sequence blastn 3506 62.1 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
12952758 12952758 PRJNA1093008_S_NODE_95951_length_241_cov_0.916667_g95624_i0 PRJNA1093008 95951 241 0.916667 2.20916747 Asfivirus haemorrhagiae 3426474 Viruses Viruses 69.4 2.15e-7   NTclustered gi|1992385840|gb|MT956648.1| 10497 g95624 i0 95.455 1.08713692946058 44 0 20 2 123 165 68209 68251 African swine fever virus isolate Uvira B53 blastn 262 69.4 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Asfuvirales Asfarviridae Asfivirus Asfivirus haemorrhagiae
12952780 12952780 PRJNA1093008_S_NODE_98511_length_233_cov_3.975000_g98184_i0 PRJNA1093008 98511 233 3.975 9.26175 Orthopoxvirus monkeypox 3431483 Viruses Viruses 54.7 0.006   NTclustered gi|2309594316|gb|OP536747.1| 10244 g98184 i0 100 12.4463519313305 29 0 12 0 130 158 119274 119302 Monkeypox virus isolate 9000365, partial genome blastn 2900 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox
21420954 21420954 PRJNA1093008_S_NODE_10437_length_438_cov_240.380822_g10111_i0 PRJNA1093008 10437 438 240.380822 1052.86800036 root 1 Root_unresolved Root_unresolved 62.1 7.03e-5   NTclustered gi|1841985160|gb|MT277585.1| 10515 g10111 i0 94.872 16.0091324200913 39 2 18 0 25 63 31100 31138 Mutant Human adenovirus 2 isolate HAdV-C2-dE3B-CMV-GFP, complete sequence blastn 7012 62.1 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
23150845 23150845 PRJNA1093008_S_NODE_41159_length_311_cov_1.294118_g40832_i0 PRJNA1093008 41159 311 1.294118 4.02470698 Erythrocytic necrosis virus 1543320 Viruses Viruses 244 4.47e-60   NTclustered gi|1624806707|gb|MK638720.1| 1543320 g40832 i0 90.374 4.5048231511254 187 17 60 1 21 207 311 126 Erythrocytic necrosis virus isolate SEQ_18 putative RNA-dependent DNA polymerase mRNA, partial cds blastn 1401 244 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;