RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1092581" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1092581 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15499369 15499369 PRJNA1092581_P_NODE_35493_length_462_cov_3.239075_g34961_i0 PRJNA1092581 35493 462 3.239075 14.9645265 Sycon sp. AR-2003 232269 Porifera other_Eukaryota 298 5.22e-76   NTclustered gi|32967439|gb|AY226074.1| 232269 g34961 i0 80.89 25.8116883116883 382 69 82 4 77 456 265 644 Scypha sp. AR-2003 elongation factor 2 mRNA, partial cds blastn 11925 298 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon sp. AR-2003
20144517 20144517 PRJNA1092581_P_NODE_27856_length_526_cov_13.896247_g27324_i0 PRJNA1092581 27856 526 13.896247 73.09425922 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 174 1.06e-38   NTclustered gi|512765256|gb|KC869494.1| 261677 g27324 i0 94.643 21.9771863117871 112 6 21 0 300 411 1216 1327 Aiolochroia crassa voucher P04 28S ribosomal RNA gene, partial sequence blastn 11560 174 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Verongiida Aplysinidae Aiolochroia Aiolochroia crassa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;