RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA1092581" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1092581 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
195551 195551 PRJNA1092581_P_NODE_101161_length_251_cov_2.634831_g100628_i0 PRJNA1092581 101161 251 2.634831 6.61342581 Cucumovirus PSV 3428133 Viruses Viruses 353 5.569999999999998e-93   NTclustered gi|4099093|gb|U83332.1|PSU83332 12313 g100628 i0 94.397 48.7490039840637 232 10 92 3 1 231 231 2 Peanut stunt virus putative RNA dependent RNA polymerase (2a) and putative movement protein (2b) genes, complete cds blastn 12236 353 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Cucumovirus Cucumovirus PSV
196680 196680 PRJNA1092581_P_NODE_32661_length_483_cov_8.148780_g32129_i0 PRJNA1092581 32661 483 8.14878 39.3586074 Allexivirus deltallii 3433711 Viruses Viruses 856 0   NTclustered gi|1722561170|gb|MN059346.1| 12430 g32129 i0 100 85.0828157349897 463 0 96 0 21 483 7952 8414 Garlic virus D isolate G120-3, complete genome blastn 41095 856 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Allexivirus Allexivirus deltallii
197089 197089 PRJNA1092581_P_NODE_47741_length_390_cov_11.151420_g47208_i0 PRJNA1092581 47741 390 11.15142 43.490538 Betaflexiviridae sp. 1955154 Viruses Viruses 359 1.96e-94   NTclustered gi|2463200070|gb|OP021693.1| 1955154 g47208 i0 91.288 1.74358974358974 264 21 67 2 3 265 8166 7904 Betaflexiviridae sp. isolate GYCV replicase, triple gene block protein1, triple gene block protein 2, triple gene block protein 3, and coat protein genes, complete cds blastn 680 359 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae   Betaflexiviridae sp.
1472526 1472526 PRJNA1092581_P_NODE_81942_length_285_cov_2.594340_g81409_i0 PRJNA1092581 81942 285 2.59434 7.393869 Trichovirus chloropersicae 3432984 Viruses Viruses 412 1.0499999999999999e-110   NTclustered gi|2504505089|gb|OP923917.1| 2358294 g81409 i0 92.982 63.3824561403509 285 16 100 2 1 285 7151 7431 Peach chlorotic leaf spot virus isolate Apricot XJ, complete genome blastn 18064 412 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus chloropersicae
2747909 2747909 PRJNA1092581_P_NODE_51963_length_372_cov_3.464883_g51430_i0 PRJNA1092581 51963 372 3.464883 12.88936476 Allexivirus ecsallii 3433712 Viruses Viruses 455 2.31e-123   NTclustered gi|410131120|gb|JQ807994.1| 150284 g51430 i0 95.172 70.8091397849462 290 11 77 2 2 288 8345 8056 Garlic virus X isolate SW3, complete genome blastn 26341 455 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Allexivirus Allexivirus ecsallii
5300478 5300478 PRJNA1092581_P_NODE_7025_length_985_cov_5.628289_g6665_i0 PRJNA1092581 7025 985 5.628289 55.43864665 Potexvirus ecscacti 3433821 Viruses Viruses 1748 0   NTclustered gi|1110865423|gb|KX883791.1| 112227 g6665 i0 99.378 2.93604060913706 964 6 98 0 1 964 2901 1938 Cactus virus X strain SCM51431 ORF1, ORF2, ORF3, and ORF4 genes, complete cds blastn 2892 1748 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecscacti
9125008 9125008 PRJNA1092581_P_NODE_59888_length_342_cov_10.602230_g59355_i0 PRJNA1092581 59888 342 10.60223 36.2596266 Allexivirus ecsascalonicum 3433713 Viruses Viruses 65.8 4.15e-6   NTclustered gi|1678654015|gb|MH389250.1| 31770 g59355 i0 80.899 2.80701754385965 89 11 25 6 21 105 1 87 Shallot virus X isolate 13-04-2, complete genome blastn 960 65.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Allexivirus Allexivirus ecsascalonicum
11675689 11675689 PRJNA1092581_P_NODE_46730_length_395_cov_4.937888_g46197_i0 PRJNA1092581 46730 395 4.937888 19.5046576 Cucumovirus PSV 3428133 Viruses Viruses 656 0   NTclustered gi|2575892182|gb|OR233183.1| 12313 g46197 i0 97.65 92.093670886076 383 7 97 2 1 382 12 393 Peanut stunt virus isolate DSMZ PV-0203 segment RNA 1, complete sequence blastn 36377 656 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Cucumovirus Cucumovirus PSV
11676277 11676277 PRJNA1092581_P_NODE_70730_length_311_cov_2.588235_g70197_i0 PRJNA1092581 70730 311 2.588235 8.04941085 Tobamovirus tomatotessellati 3432892 Viruses Viruses 575 1.3899999999999995e-159   NTclustered gi|2201440261|gb|OL652662.1| 12253 g70197 i0 100 99.9228295819936 311 0 100 0 1 311 4608 4918 Tomato mosaic virus isolate NVWA36783860, complete genome blastn 31076 575 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
21872957 21872957 PRJNA1092581_P_NODE_14078_length_734_cov_10.284418_g13589_i0 PRJNA1092581 14078 734 10.284418 75.48762812 Tobamovirus capsici 3432865 Viruses Viruses 1339 0   NTclustered gi|1791312535|gb|MN616927.1| 12239 g13589 i0 99.591 94.4291553133515 734 3 100 0 1 734 4843 5576 Pepper mild mottle virus isolate ZJ2, complete genome blastn 69311 1339 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus capsici
21873041 21873041 PRJNA1092581_P_NODE_16938_length_674_cov_3.231281_g16429_i0 PRJNA1092581 16938 674 3.231281 21.77883394 Allexivirus alphallii 3433708 Viruses Viruses 1194 0   NTclustered gi|1722560631|gb|MN059269.1| 12433 g16429 i0 99.542 94.5548961424332 655 3 97 0 1 655 8664 8010 Garlic virus A isolate G26-3, complete genome blastn 63730 1194 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Allexivirus Allexivirus alphallii
23147842 23147842 PRJNA1092581_P_NODE_106519_length_244_cov_5.912281_g105986_i0 PRJNA1092581 106519 244 5.912281 14.42596564 Cucumovirus CMV 3428131 Viruses Viruses 412 8.759999999999998e-111   NTclustered gi|2017768906|gb|MW556589.1| 12305 g105986 i0 100 91.4426229508197 223 0 91 0 21 243 670 892 Cucumber mosaic virus isolate WSJ segment RNA3, complete sequence blastn 22312 412 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Cucumovirus Cucumovirus CMV

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;