contig_metadata
18 rows where analysis = "blastn", bioproject = "PRJNA1092581" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 196909 | 196909 | PRJNA1092581_P_NODE_41101_length_426_cov_3.756374_g40568_i0 | PRJNA1092581 | 41101 | 426 | 3.756374 | 16.00215324 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 440 | 7.499999999999998e-119 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g40568 | i0 | 86.914 | 403.767605633803 | 405 | 37 | 94 | 14 | 22 | 420 | 1904761 | 1904367 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 172005 | 440 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 197201 | 197201 | PRJNA1092581_P_NODE_52501_length_370_cov_1.885522_g51968_i0 | PRJNA1092581 | 52501 | 370 | 1.885522 | 6.9764314 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 361 | 5.139999999999999e-95 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g51968 | i0 | 85.345 | 1.88918918918919 | 348 | 51 | 94 | 0 | 21 | 368 | 4105741 | 4105394 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 699 | 361 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 1017814 | 1017814 | PRJNA1092581_P_NODE_1201_length_1689_cov_12.641089_g1087_i0 | PRJNA1092581 | 1201 | 1689 | 12.641089 | 213.50799321 | Gemmatimonas | 173479 | Bacteria | Bacteria | 1903 | 0 | NTclustered | gi|1015602748|gb|CP011454.1| | 1379270 | g1087 | i0 | 87.455 | 230.891059798697 | 1682 | 173 | 99 | 34 | 4 | 1669 | 2076354 | 2074695 | Gemmatimonas phototrophica strain AP64, complete genome | blastn | 389975 | 1908 | 0.997379454926625 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas phototrophica | |
| 2746993 | 2746993 | PRJNA1092581_P_NODE_1883_length_1512_cov_8.797776_g1087_i1 | PRJNA1092581 | 1883 | 1512 | 8.797776 | 133.02237312 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 1748 | 0 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g1087 | i1 | 88.102 | 154.747354497355 | 1496 | 147 | 98 | 26 | 19 | 1497 | 3042303 | 3043784 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 233978 | 1748 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 4022489 | 4022489 | PRJNA1092581_P_NODE_115524_length_231_cov_2.145570_g114991_i0 | PRJNA1092581 | 115524 | 231 | 2.14557 | 4.9562667 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 311 | 3.08e-80 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g114991 | i0 | 94.554 | 209.285714285714 | 202 | 10 | 87 | 1 | 30 | 231 | 3044647 | 3044447 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 48345 | 311 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 6575311 | 6575311 | PRJNA1092581_P_NODE_62606_length_334_cov_3.731801_g62073_i0 | PRJNA1092581 | 62606 | 334 | 3.731801 | 12.46421534 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 359 | 1.66e-94 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g62073 | i0 | 87.037 | 327.044910179641 | 324 | 35 | 96 | 6 | 14 | 334 | 172211 | 172530 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 109233 | 359 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 7850001 | 7850001 | PRJNA1092581_P_NODE_58367_length_348_cov_2.345455_g57834_i0 | PRJNA1092581 | 58367 | 348 | 2.345455 | 8.1621834 | uncultured Gemmatimonadaceae bacterium | 246130 | Bacteria | Bacteria | 350 | 1.04e-91 | NTclustered | gi|2874253995|emb|OY970320.1| | 246130 | g57834 | i0 | 86.943 | 146.278735632184 | 314 | 38 | 90 | 3 | 17 | 328 | 234204 | 233892 | MAG: uncultured Gemmatimonadaceae bacterium isolate MFD00031.bin.c.2 genome assembly, chromosome: 1 | blastn | 50905 | 350 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | uncultured Gemmatimonadaceae bacterium | ||
| 7850879 | 7850879 | PRJNA1092581_P_NODE_93007_length_264_cov_2.816754_g92474_i0 | PRJNA1092581 | 93007 | 264 | 2.816754 | 7.43623056 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 195 | 3.79e-45 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g92474 | i0 | 80.303 | 1.31818181818182 | 264 | 46 | 99 | 5 | 4 | 264 | 4978306 | 4978046 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 348 | 195 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 7850896 | 7850896 | PRJNA1092581_P_NODE_93807_length_263_cov_1.457895_g93274_i0 | PRJNA1092581 | 93807 | 263 | 1.457895 | 3.83426385 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 331 | 2.75e-86 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g93274 | i0 | 89.354 | 1.61596958174905 | 263 | 28 | 100 | 0 | 1 | 263 | 1275203 | 1275465 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 425 | 331 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 10400316 | 10400316 | PRJNA1092581_P_NODE_45289_length_402_cov_38.990881_g44756_i0 | PRJNA1092581 | 45289 | 402 | 38.990881 | 156.74334162 | Pseudogemmatithrix spongiicola | 3062599 | Bacteria | Bacteria | 233 | 1.2799999999999998e-56 | NTclustered | gi|2557479348|gb|CP130613.1| | 3062599 | g44756 | i0 | 89.674 | 1.9228855721393 | 184 | 17 | 46 | 2 | 22 | 204 | 1211832 | 1212014 | Pseudogemmatithrix spongiicola strain 318 chromosome, complete genome | blastn | 773 | 233 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Pseudogemmatithrix | Pseudogemmatithrix spongiicola | |
| 12950760 | 12950760 | PRJNA1092581_P_NODE_47811_length_390_cov_4.400631_g47278_i0 | PRJNA1092581 | 47811 | 390 | 4.400631 | 17.1624609 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 385 | 3.24e-102 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g47278 | i0 | 85.372 | 47.1384615384615 | 376 | 50 | 96 | 5 | 17 | 389 | 421225 | 420852 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 18384 | 385 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 15500705 | 15500705 | PRJNA1092581_P_NODE_86853_length_275_cov_3.054455_g86320_i0 | PRJNA1092581 | 86853 | 275 | 3.054455 | 8.39975125 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 272 | 1.78e-68 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g86320 | i0 | 85.824 | 78.0581818181818 | 261 | 32 | 94 | 4 | 4 | 261 | 423454 | 423712 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 21466 | 272 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 15500737 | 15500737 | PRJNA1092581_P_NODE_87913_length_273_cov_3.475000_g87380_i0 | PRJNA1092581 | 87913 | 273 | 3.475 | 9.48675 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 285 | 2.2699999999999996e-72 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g87380 | i0 | 85.978 | 0.992673992673993 | 271 | 33 | 98 | 4 | 6 | 272 | 4679799 | 4680068 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 271 | 285 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 16773873 | 16773873 | PRJNA1092581_P_NODE_37734_length_447_cov_2.056150_g37202_i0 | PRJNA1092581 | 37734 | 447 | 2.05615 | 9.1909905 | uncultured Gemmatimonadaceae bacterium | 246130 | Bacteria | Bacteria | 257 | 8.54e-64 | NTclustered | gi|2874253995|emb|OY970320.1| | 246130 | g37202 | i0 | 78.118 | 94.013422818792 | 425 | 79 | 94 | 14 | 30 | 447 | 1390637 | 1391054 | MAG: uncultured Gemmatimonadaceae bacterium isolate MFD00031.bin.c.2 genome assembly, chromosome: 1 | blastn | 42024 | 257 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | uncultured Gemmatimonadaceae bacterium | ||
| 16775270 | 16775270 | PRJNA1092581_P_NODE_93414_length_263_cov_5.231579_g92881_i0 | PRJNA1092581 | 93414 | 263 | 5.231579 | 13.75905277 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 339 | 1.65e-88 | NTclustered | gi|2874253938|emb|OY970263.1| | 412054 | g92881 | i0 | 93.778 | 108.539923954373 | 225 | 14 | 86 | 0 | 14 | 238 | 802576 | 802352 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02416.bin.2.26 genome assembly, chromosome: 1 | blastn | 28546 | 339 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 20599197 | 20599197 | PRJNA1092581_P_NODE_91077_length_267_cov_7.175258_g90544_i0 | PRJNA1092581 | 91077 | 267 | 7.175258 | 19.15793886 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 311 | 3.65e-80 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g90544 | i0 | 92.593 | 29.6928838951311 | 216 | 16 | 81 | 0 | 33 | 248 | 1903502 | 1903287 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 7928 | 311 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 21873892 | 21873892 | PRJNA1092581_P_NODE_4798_length_1132_cov_54.186969_g4525_i0 | PRJNA1092581 | 4798 | 1132 | 54.186969 | 613.39648908 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 1003 | 0 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g4525 | i0 | 86.739 | 525.222614840989 | 920 | 100 | 80 | 18 | 217 | 1123 | 1296459 | 1295549 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 594552 | 1003 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 24421740 | 24421740 | PRJNA1092581_P_NODE_117120_length_228_cov_4.238710_g116587_i0 | PRJNA1092581 | 117120 | 228 | 4.23871 | 9.6642588 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 100 | 7.16e-17 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g116587 | i0 | 79.333 | 0.657894736842105 | 150 | 25 | 63 | 3 | 32 | 175 | 2151332 | 2151481 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 150 | 100 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;