RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1092581" and tax_phylum = "Duplornaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1092581 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18047392 18047392 PRJNA1092581_P_NODE_108375_length_242_cov_3.136095_g107842_i0 PRJNA1092581 108375 242 3.136095 7.5893499 Coltivirus dermacentoris 3428066 Viruses Viruses 342 1.16e-89   NTclustered gi|2758887253|gb|PP473574.1| 46839 g107842 i0 97.044 1.45454545454545 203 6 84 0 40 242 4486 4688 MAG: Colorado tick fever virus isolate HL11 segment 1, complete sequence blastn 352 342 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Coltivirus Coltivirus dermacentoris
20597295 20597295 PRJNA1092581_P_NODE_17357_length_667_cov_2.794613_g16845_i0 PRJNA1092581 17357 667 2.794613 18.64006871 Coltivirus dermacentoris 3428066 Viruses Viruses 996 0   NTclustered gi|2758887253|gb|PP473574.1| 46839 g16845 i0 96.072 81.3973013493253 611 24 92 0 55 665 5388 4778 MAG: Colorado tick fever virus isolate HL11 segment 1, complete sequence blastn 54292 996 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Coltivirus Coltivirus dermacentoris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;