RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1092581" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1092581 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4846111 4846111 PRJNA1092581_P_NODE_18944_length_639_cov_4.224382_g18427_i0 PRJNA1092581 18944 639 4.224382 26.99380098 Metazoa 33208 Cnidaria other_Eukaryota 58.4 0.001   NTclustered gi|2917940744|emb|OZ237568.1| 6108 g18427 i0 100 1.01408450704225 31 0 5 0 370 400 4588314 4588284 Anemonia sulcata genome assembly, chromosome: 14 blastn 648 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
12949230 12949230 PRJNA1092581_P_NODE_102191_length_250_cov_1.389831_g101658_i0 PRJNA1092581 102191 250 1.389831 3.4745775 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.023   NTclustered gi|2917940701|emb|OZ237558.1| 6108 g101658 i0 100 0.112 28 0 11 0 152 179 6795959 6795986 Anemonia sulcata genome assembly, chromosome: 4 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
16775321 16775321 PRJNA1092581_P_NODE_95354_length_260_cov_3.347594_g94821_i0 PRJNA1092581 95354 260 3.347594 8.7037444 Stylophora pistillata 50429 Cnidaria other_Eukaryota 71.3 6.54e-8   NTclustered gi|1270070985|ref|XR_002695435.1| 50429 g94821 i0 87.097 0.607692307692308 62 8 24 0 56 117 111 172 PREDICTED: Stylophora pistillata uncharacterized LOC111336533 (LOC111336533), ncRNA blastn 158 71.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;