RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1092581" and tax_phylum = "Candidatus Melainabacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1092581 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1018501 1018501 PRJNA1092581_P_NODE_67141_length_320_cov_10.639676_g66608_i0 PRJNA1092581 67141 320 10.639676 34.0469632 Vampirovibrio 213484 Bacteria Bacteria 475 1.5e-129   NTclustered gi|559795318|ref|NR_104911.1| 758823 g66608 i0 97.153 87.11875 281 8 88 0 23 303 604 884 Vampirovibrio chlorellavorus strain ICPB 3707 16S ribosomal RNA, partial sequence blastn 27878 475 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria Vampirovibriophyceae Vampirovibrionales   Vampirovibrio Vampirovibrio chlorellavorus
11675866 11675866 PRJNA1092581_P_NODE_54090_length_363_cov_5.896552_g53557_i0 PRJNA1092581 54090 363 5.896552 21.40448376 Candidatus Gastranaerophilales bacterium 2137880 Bacteria Bacteria 520 7.849999999999998e-143   NTclustered gi|2729058672|emb|OZ006972.1| 2137880 g53557 i0 95.137 127.132231404959 329 16 91 0 21 349 512231 511903 MAG: Candidatus Gastranaerophilales bacterium isolate metabat2_pooled_hifiasm.1023 MAG genome assembly, chromosome: 1 blastn 46149 520 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Gastranaerophilales     Candidatus Gastranaerophilales bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;