RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1089179" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1089179 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6572703 6572703 PRJNA1089179_P_NODE_3006_length_461_cov_102.324742_g2988_i0 PRJNA1089179 3006 461 102.324742 471.71706062 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 808 0   NTclustered gi|681870004|gb|KM001687.1| 1542451 g2988 i0 99.773 68.4316702819957 440 1 95 0 1 440 2644 2205 Myxidium streisingeri clone ZF12 18S small subunit ribosomal RNA gene, partial sequence blastn 31547 808 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri
16771815 16771815 PRJNA1089179_P_NODE_18274_length_201_cov_38.179688_g18256_i0 PRJNA1089179 18274 201 38.179688 76.74117288 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 244 2.69e-60   NTclustered gi|681870004|gb|KM001687.1| 1542451 g18256 i0 97.222 67.9601990049751 144 4 90 0 58 201 1074 931 Myxidium streisingeri clone ZF12 18S small subunit ribosomal RNA gene, partial sequence blastn 13660 244 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri
16771828 16771828 PRJNA1089179_P_NODE_5594_length_365_cov_4.017123_g5576_i0 PRJNA1089179 5594 365 4.017123 14.66249895 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 662 0   NTclustered gi|681870002|gb|KM001685.1| 1542451 g5576 i0 99.451 97.827397260274 364 2 99 0 2 365 2022 1659 Myxidium streisingeri clone ZF5 18S small subunit ribosomal RNA gene, partial sequence blastn 35707 662 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri
18046496 18046496 PRJNA1089179_P_NODE_13135_length_261_cov_5.670213_g13117_i0 PRJNA1089179 13135 261 5.670213 14.79925593 Eunicella cavolini 317547 Cnidaria other_Eukaryota 52.8 0.024   NTclustered gi|2918369551|emb|OZ237723.1| 317547 g13117 i0 100 0.10727969348659 28 0 11 0 204 231 2886323 2886350 Eunicella cavolini genome assembly, chromosome: 7 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
18046530 18046530 PRJNA1089179_P_NODE_18035_length_226_cov_11.549020_g18017_i0 PRJNA1089179 18035 226 11.54902 26.1007852 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 377 2.92e-100   NTclustered gi|681870004|gb|KM001687.1| 1542451 g18017 i0 100 83.5265486725664 204 0 90 0 1 204 1656 1453 Myxidium streisingeri clone ZF12 18S small subunit ribosomal RNA gene, partial sequence blastn 18877 377 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri
19320563 19320563 PRJNA1089179_P_NODE_17876_length_229_cov_14.108974_g17858_i0 PRJNA1089179 17876 229 14.108974 32.30955046 Chloromyxum cristatum 650990 Cnidaria other_Eukaryota 139 1.52e-28   NTclustered gi|241911748|gb|FJ417054.1| 650990 g17858 i0 100 31.7903930131004 75 0 33 0 1 75 2927 3001 Chloromyxum cristatum isolate M0178 28S large subunit ribosomal RNA gene, partial sequence blastn 7280 139 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Chloromyxidae Chloromyxum Chloromyxum cristatum
19320579 19320579 PRJNA1089179_P_NODE_8916_length_306_cov_1.489270_g8898_i0 PRJNA1089179 8916 306 1.48927 4.5571662 Hydra vulgaris 6087 Cnidaria other_Eukaryota 163 1.26e-35   NTclustered gi|2744813892|ref|XM_002159412.5| 6087 g8898 i0 83.146 1.12745098039216 178 30 58 0 129 306 143 320 PREDICTED: Hydra vulgaris dynein light chain 2, cytoplasmic (LOC100198469), mRNA blastn 345 163 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
23146991 23146991 PRJNA1089179_P_NODE_2199_length_519_cov_67.957399_g2181_i0 PRJNA1089179 2199 519 67.957399 352.69890081 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 813 0   NTclustered gi|681870004|gb|KM001687.1| 1542451 g2181 i0 99.775 39.4412331406551 444 0 86 1 76 519 1 443 Myxidium streisingeri clone ZF12 18S small subunit ribosomal RNA gene, partial sequence blastn 20470 813 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;