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contig_metadata

31 rows where analysis = "blastn", bioproject = "PRJNA1089179" and tax_phylum = "Chlorophyta"

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tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 31 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1089179 · 31 ✖

analysis 1

  • blastn · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
194866 194866 PRJNA1089179_P_NODE_1661_length_569_cov_1.897177_g1644_i0 PRJNA1089179 1661 569 1.897177 10.79493713 Boodleopsis sp. FL1161 2364084 Plants Plants 122 4.2199999999999997e-23   NTclustered gi|1482676016|gb|MH591102.1| 2364084 g1644 i0 91.954 15.3391915641476 87 7 15 0 482 568 33973 33887 Boodleopsis sp. FL1161 voucher FL1161 chloroplast, complete genome blastn 8728 122 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Halimedaceae Boodleopsis Boodleopsis sp. FL1161
1469412 1469412 PRJNA1089179_P_NODE_1462_length_591_cov_13.428571_g1445_i0 PRJNA1089179 1462 591 13.428571 79.36285461 Trentepohlia odorata 2576626 Plants Plants 797 0   NTclustered gi|1707505678|ref|NC_043776.1| 2576626 g1445 i0 91.522 0.978003384094755 578 49 98 0 1 578 337884 338461 Trentepohlia odorata chloroplast, complete genome blastn 578 797 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Trentepohliales Trentepohliaceae Trentepohlia Trentepohlia odorata
1469435 1469435 PRJNA1089179_P_NODE_422_length_875_cov_19.615960_g409_i0 PRJNA1089179 422 875 19.61596 171.63965 uncultured Trentepohlia photobiont 2678329 Plants Plants 442 4.479999999999998e-119   NTclustered gi|1547597693|gb|MK110507.1| 2678329 g409 i0 80.405 61.8422857142857 592 107 67 9 40 625 7540 8128 Uncultured Trentepohlia photobiont clone 49423 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S large subunit ribosomal RNA gene, complete sequence blastn 54112 442 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Trentepohliales     uncultured Trentepohlia photobiont
1469439 1469439 PRJNA1089179_P_NODE_6622_length_343_cov_2.585185_g6604_i0 PRJNA1089179 6622 343 2.585185 8.86718455 Parietochloris pseudoalveolaris 3102 Plants Plants 302 2.92e-77   NTclustered gi|725650801|ref|NC_025532.1| 3102 g6604 i0 83.183 98.0262390670554 333 52 97 4 13 343 85223 84893 Ettlia pseudoalveolaris culture-collection UTEX:975 chloroplast, complete genome blastn 33623 302 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Parietochloris Parietochloris pseudoalveolaris
2745548 2745548 PRJNA1089179_P_NODE_17083_length_242_cov_0.863905_g17065_i0 PRJNA1089179 17083 242 0.863905 2.0906501 Asterarcys sp. GP-2019 2650791 Plants Plants 60.2 1.3e-4   NTclustered gi|1760231229|gb|MK995333.1| 2650791 g17065 i0 83.871 0.256198347107438 62 10 26 0 41 102 95349 95288 Asterarcys sp. GP-2019 chloroplast, complete genome blastn 62 60.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Asterarcys Asterarcys sp. GP-2019
2745568 2745568 PRJNA1089179_P_NODE_7963_length_320_cov_1.238866_g7945_i0 PRJNA1089179 7963 320 1.238866 3.9643712 Dicloster acuatus 91190 Plants Plants 342 1.59e-89   NTclustered gi|725651324|ref|NC_025546.1| 91190 g7945 i0 86.12 93.990625 317 44 99 0 1 317 14783 15099 Dicloster acuatus culture-collection SAG:41.98 chloroplast, complete genome blastn 30077 342 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Dicloster Dicloster acuatus
4021469 4021469 PRJNA1089179_P_NODE_6744_length_341_cov_1.537313_g6726_i0 PRJNA1089179 6744 341 1.537313 5.24223733 Pseudocodium devriesii 453070 Plants Plants 137 8.65e-28   NTclustered gi|1509835338|ref|NC_039525.1| 453070 g6726 i0 86.508 4.50733137829912 126 16 37 1 1 126 52174 52298 Pseudocodium devriesii voucher DH02.0274 chloroplast, complete genome blastn 1537 137 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Halimedaceae Pseudocodium Pseudocodium devriesii
4845621 4845621 PRJNA1089179_P_NODE_15704_length_246_cov_1.138728_g15686_i0 PRJNA1089179 15704 246 1.138728 2.80127088 Sphaeropleales 35491 Plants Plants 219 2.07e-52   NTclustered gi|2692951716|ref|NC_086754.1| 119574 g15686 i0 83.539 85.2886178861789 243 30 97 10 1 238 138664 138901 Tetradesmus dimorphus strain FBCC-A0330 chloroplast, complete genome blastn 20981 220 0.995454545454545 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus dimorphus
4845632 4845632 PRJNA1089179_P_NODE_8564_length_311_cov_0.941176_g8546_i0 PRJNA1089179 8564 311 0.941176 2.92705736 Chlorophyta 3041 Plants Plants 298 3.38e-76   NTclustered gi|9858546|gb|AF189063.1| 135262 g8546 i0 84.667 95.8585209003215 300 44 96 2 3 301 947 1245 Prasiola fluviatilis ribulose bisphosphate carboxylase large subunit (rbcL) gene, partial cds; chloroplast gene for chloroplast product blastn 29812 298 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Prasiolaceae Vittaprasiola Vittaprasiola fluviatilis
6572679 6572679 PRJNA1089179_P_NODE_1326_length_609_cov_2.117537_g1309_i0 PRJNA1089179 1326 609 2.117537 12.89580033 Coelastrum microporum 55409 Plants Plants 281 7.07e-71   NTclustered gi|2386955046|ref|NC_068582.1| 55409 g1309 i0 80.366 25.9868637110016 382 66 62 8 6 381 138948 139326 Coelastrum microporum chloroplast, complete genome blastn 15826 281 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Coelastrum Coelastrum microporum
6572716 6572716 PRJNA1089179_P_NODE_7406_length_329_cov_1.203125_g7388_i0 PRJNA1089179 7406 329 1.203125 3.95828125 Cephaleuros virescens 173371 Plants Plants 241 6.160000000000001e-59   NTclustered gi|2192923665|ref|NC_060531.1| 173371 g7388 i0 82.007 36.5957446808511 289 46 87 4 44 329 69114 68829 Cephaleuros virescens strain SAG 42.85 chloroplast, complete genome blastn 12040 241 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Trentepohliales Trentepohliaceae Cephaleuros Cephaleuros virescens
7847494 7847494 PRJNA1089179_P_NODE_47_length_1762_cov_5.762581_g41_i0 PRJNA1089179 47 1762 5.762581 101.53667722 Trentepohlia odorata 2576626 Plants Plants 1382 0   NTclustered gi|1707505678|ref|NC_043776.1| 2576626 g41 i0 90.83 0.956299659477866 1036 90 95 4 1 1035 337923 336892 Trentepohlia odorata chloroplast, complete genome blastn 1685 1382 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Trentepohliales Trentepohliaceae Trentepohlia Trentepohlia odorata
7847504 7847504 PRJNA1089179_P_NODE_8387_length_313_cov_2.412500_g8369_i0 PRJNA1089179 8387 313 2.4125 7.551125 Trentepohlia odorata 2576626 Plants Plants 340 5.58e-89   NTclustered gi|1707505678|ref|NC_043776.1| 2576626 g8369 i0 86.262 34.9776357827476 313 43 100 0 1 313 335879 336191 Trentepohlia odorata chloroplast, complete genome blastn 10948 340 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Trentepohliales Trentepohliaceae Trentepohlia Trentepohlia odorata
9122431 9122431 PRJNA1089179_P_NODE_3068_length_458_cov_2.038961_g3050_i0 PRJNA1089179 3068 458 2.038961 9.33844138 Trentepohlia odorata 2576626 Plants Plants 110 2.6e-19   NTclustered gi|1707505678|ref|NC_043776.1| 2576626 g3050 i0 92.208 1.70960698689956 77 6 17 0 382 458 156012 155936 Trentepohlia odorata chloroplast, complete genome blastn 783 110 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Trentepohliales Trentepohliaceae Trentepohlia Trentepohlia odorata
9122446 9122446 PRJNA1089179_P_NODE_8_length_3174_cov_79.094163_g6_i0 PRJNA1089179 8 3174 79.094163 2510.44873362 Chloropicon maureeniae 1461542 Plants Plants 1640 0   NTclustered gi|1678645689|ref|NC_042488.1| 1461542 g6 i0 80.043 94.8733459357278 2330 372 72 70 364 2633 4569 2273 Chloropicon maureeniae culture RCC:3374 chloroplast, complete genome blastn 301128 1640 1 Eukaryota   Viridiplantae Chlorophyta Chloropicophyceae Chloropicales Chloropicaceae Chloropicon Chloropicon maureeniae
10398119 10398119 PRJNA1089179_P_NODE_2869_length_470_cov_1.465995_g2851_i0 PRJNA1089179 2869 470 1.465995 6.8901765 Caulerpa brownii 511814 Plants Plants 226 2.5399999999999994e-54   NTclustered gi|1409969941|gb|MG721672.1| 511814 g2851 i0 89.503 38.1170212765957 181 15 38 4 286 464 3381 3559 Caulerpa brownii ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit) gene, partial cds; chloroplast blastn 17915 226 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Caulerpaceae Caulerpa Caulerpa brownii
10398121 10398121 PRJNA1089179_P_NODE_3449_length_439_cov_1.114754_g3431_i0 PRJNA1089179 3449 439 1.114754 4.89377006 Edaphochlorella mirabilis 3083 Plants Plants 414 4.6999999999999986e-111   NTclustered gi|725675941|ref|NC_025528.1| 3083 g3431 i0 84.101 92.5580865603645 434 63 98 5 9 439 82044 81614 'Chlorella' mirabilis culture-collection SAG:38.88 chloroplast, complete genome blastn 40633 414 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Prasiolaceae Edaphochlorella Edaphochlorella mirabilis
14223569 14223569 PRJNA1089179_P_NODE_812_length_714_cov_2.695788_g796_i0 PRJNA1089179 812 714 2.695788 19.24792632 Trentepohlia odorata 2576626 Plants Plants 627 9.329999999999999e-175   NTclustered gi|1707505678|ref|NC_043776.1| 2576626 g796 i0 82.663 1.00980392156863 721 112 100 12 1 714 215538 216252 Trentepohlia odorata chloroplast, complete genome blastn 721 627 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Trentepohliales Trentepohliaceae Trentepohlia Trentepohlia odorata
15497399 15497399 PRJNA1089179_P_NODE_11813_length_274_cov_1.149254_g11795_i0 PRJNA1089179 11813 274 1.149254 3.14895596 Capsosiphon fulvescens 205396 Plants Plants 73.1 1.93e-8   NTclustered gi|1526689644|ref|NC_039920.1| 205396 g11795 i0 93.75 0.492700729927007 48 3 18 0 215 262 34836 34789 Capsosiphon fulvescens plastid, complete genome blastn 135 73.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulotrichales Ulotrichaceae Capsosiphon Capsosiphon fulvescens
16320068 16320068 PRJNA1089179_P_NODE_1753_length_560_cov_1.197125_g1736_i0 PRJNA1089179 1753 560 1.197125 6.7039 Chlorophyta 3041 Plants Plants 394 7.96e-105   NTclustered gi|1388162364|gb|MF276979.1| 3105 g1736 i0 89.241 56.5678571428571 316 32 56 2 1 315 50784 51098 Pediastrum duplex chloroplast, complete genome blastn 31678 394 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Hydrodictyaceae Pediastrum Pediastrum duplex
16771818 16771818 PRJNA1089179_P_NODE_3094_length_457_cov_1.130208_g3076_i0 PRJNA1089179 3094 457 1.130208 5.16505056 Trebouxia sp. SL0000003 3350044 Plants Plants 134 1.54e-26   NTclustered gi|2917929693|emb|OZ234920.1| 3350044 g3076 i0 82.166 9.86214442013129 157 26 34 2 33 188 2135509 2135664 Trebouxia sp. SL0000003 genome assembly, chromosome: 15 blastn 4507 134 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
16771827 16771827 PRJNA1089179_P_NODE_54_length_1679_cov_4.077833_g48_i0 PRJNA1089179 54 1679 4.077833 68.46681607 Trentepohlia odorata 2576626 Plants Plants 1120 0   NTclustered gi|1707505678|ref|NC_043776.1| 2576626 g48 i0 78.817 1.00655151876117 1690 339 99 13 2 1677 215489 213805 Trentepohlia odorata chloroplast, complete genome blastn 1690 1120 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Trentepohliales Trentepohliaceae Trentepohlia Trentepohlia odorata
18869178 18869178 PRJNA1089179_P_NODE_1515_length_585_cov_2.355469_g1498_i0 PRJNA1089179 1515 585 2.355469 13.77949365 Chlorophyceae 3166 Plants Plants 233 1.92e-56   NTclustered gi|2312613210|ref|NC_066651.1| 77547 g1498 i0 92.121 30.2495726495726 165 13 28 0 407 571 60103 59939 Desmodesmus abundans strain FBCC-A1277 chloroplast, complete genome blastn 17696 235 0.991489361702128 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Desmodesmus Desmodesmus abundans
18869186 18869186 PRJNA1089179_P_NODE_2535_length_493_cov_3.797619_g2517_i0 PRJNA1089179 2535 493 3.797619 18.72226167 Caulerpa 76312 Plants Plants 222 3.47e-53   NTclustered gi|2314983048|ref|NC_066970.1| 76313 g2517 i0 88.172 36.1683569979716 186 22 38 0 212 397 93996 93811 Caulerpa taxifolia chloroplast, complete genome blastn 17831 222 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Caulerpaceae Caulerpa Caulerpa taxifolia
21419567 21419567 PRJNA1089179_P_NODE_18137_length_218_cov_5.517241_g18119_i0 PRJNA1089179 18137 218 5.517241 12.02758538 Chlorophyta 3041 Plants Plants 315 2.23e-81   NTclustered gi|1561005761|gb|MG493377.1| 167235 g18119 i0 92.727 100.912844036697 220 13 100 3 1 218 1399 1617 Uncultured Trebouxiophyceae clone LSY2060 18S ribosomal RNA gene, partial sequence blastn 21999 315 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae       uncultured Trebouxiophyceae
23147004 23147004 PRJNA1089179_P_NODE_799_length_719_cov_100.236842_g783_i0 PRJNA1089179 799 719 100.236842 720.70289398 Cephaleuros karstenii 1985640 Plants Plants 346 2.95e-90   NTclustered gi|2777863979|gb|PQ072646.1| 1985640 g783 i0 85.38 47.7190542420028 342 41 47 7 381 719 15 350 Cephaleuros karstenii strain SXH2407 large subunit ribosomal RNA gene, partial sequence blastn 34310 346 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Trentepohliales Trentepohliaceae Cephaleuros Cephaleuros karstenii
23147006 23147006 PRJNA1089179_P_NODE_8099_length_318_cov_1.167347_g8081_i0 PRJNA1089179 8099 318 1.167347 3.71216346 Parietochloris pseudoalveolaris 3102 Plants Plants 309 1.6e-79   NTclustered gi|725650801|ref|NC_025532.1| 3102 g8081 i0 86.909 82.5503144654088 275 36 86 0 21 295 54506 54232 Ettlia pseudoalveolaris culture-collection UTEX:975 chloroplast, complete genome blastn 26251 309 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Parietochloris Parietochloris pseudoalveolaris
23969934 23969934 PRJNA1089179_P_NODE_1599_length_575_cov_2.023904_g1582_i0 PRJNA1089179 1599 575 2.023904 11.637448 Chlorophyta 3041 Plants Plants 111 9.23e-20   NTclustered gi|1509835249|ref|NC_039524.1| 221038 g1582 i0 85.321 1.96173913043478 109 14 19 2 222 329 48237 48130 Codium arabicum voucher HV03886 chloroplast, complete genome blastn 1128 111 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Codiaceae Codium Codium arabicum
24420651 24420651 PRJNA1089179_P_NODE_12420_length_268_cov_1.856410_g12402_i0 PRJNA1089179 12420 268 1.85641 4.9751788 Cladogonium sp. JMB-2020 2756148 Plants Plants 496 9.429999999999999e-136   NTclustered gi|1877816733|gb|MT789773.1| 2756148 g12402 i0 100 97.160447761194 268 0 100 0 1 268 505 772 Cladogonium sp. JMB-2020 isolate 1 small subunit ribosomal RNA gene, partial sequence blastn 26039 496 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Cladophorales Pithophoraceae Cladogonium Cladogonium sp. JMB-2020
24420673 24420673 PRJNA1089179_P_NODE_16900_length_242_cov_0.911243_g16882_i0 PRJNA1089179 16900 242 0.911243 2.20520806 Chlamydomonas reinhardtii 3055 Plants Plants 420 5.19e-113   NTclustered gi|2082265400|ref|XM_043070283.1| 3055 g16882 i0 100 14.6859504132231 227 0 94 0 16 242 2324 2550 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_14g626400v5), mRNA blastn 3554 420 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
24420681 24420681 PRJNA1089179_P_NODE_4020_length_414_cov_2.413490_g4002_i0 PRJNA1089179 4020 414 2.41349 9.9918486 Rhexinema sarcinoideum 43261 Plants Plants 89.8 3.03e-13   NTclustered gi|1052423652|gb|KX306821.1| 43261 g4002 i0 81.818 3.23188405797101 110 16 26 4 307 414 77365 77258 Rhexinema sarcinoideum chloroplast, complete genome blastn 1338 89.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulotrichales Helicodictyaceae Rhexinema Rhexinema sarcinoideum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;